Evidence map›Paper›PMID 11402189›Full record

ArticlePlant physiology2001

shygrl1 is a mutant affected in multiple aspects of photomorphogenesis.

M Santiago-Ong, R M Green, S Tingay, J A Brusslan, E M Tobin

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact, top 77% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

M Santiago-OngDepartment of Molecular, Cell, and Developmental Biology, P.O. Box 951606, University of California, Los Angeles, California 90095-1606, USA.
R M Green
S Tingay
J A Brusslan
E M Tobin
University of California, Los Angeles · USCalifornia State University, Long Beach · US

Funding

Understanding the basis of circadian rhythms in the model system ArabidopsisR01GM023167 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI TOBIN, ELAINE MUNSEY · 1985 to 2010
$4.0M
NIGMS NIH HHS R01 GM023167NIGMS NIH HHS R01-GM23167
6 · The paper itself

Abstract

We have used a counter-selection strategy based on aberrant phytochrome regulation of an Lhcb gene to isolate an Arabidopsis mutant designated shygrl1 (shg1). shg1 seedlings have reduced phytochrome-mediated induction of the Lhcb gene family, but normal phytochrome-mediated induction of several other genes, including the rbcS1a gene. Additional phenotypes observed in shg1 plants include reduced chlorophyll in leaves and additional photomorphogenic abnormalities when the seedlings are grown on medium containing sucrose. Mutations in the TATA-proximal region of the Lhcb1*3 promoter that are known to be important for phytochrome regulation affected reporter gene expression in a manner similar to the shg1 mutation. Our results are consistent with the possibility that the mutation either leads to defective chloroplast development or to aberrant phytochrome regulation. They also add to the evidence of complex interactions between light- and sucrose-regulated pathways.

Indexed as

Genes, PlantMorphogenesisMutationArabidopsisBase SequenceChromosome MappingDNA PrimersGenes, ReporterGlucuronidasePhytochromePromoter Regions, GeneticDNA PrimersGlucuronidasePhytochrome

Identifiers

PMID11402189
PMCPMC111151
OpenAlexW2163281287

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.