Evidence map›Paper›PMID 11402166›Full record

ArticleThe Plant cell2001

Nodule-specific regulation of phosphatidylinositol transfer protein expression in Lotus japonicus.

P Kapranov, S M Routt, V A Bankaitis, F J de Bruijn, K Szczyglowski

Open access · greenAbstract read
In one paragraph

Article in The Plant cell, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
6.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 70 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

P KapranovDepartment of Energy Plant Research Laboratory, Michigan State University, East Lansing, Michigan 48824, USA.
S M Routt
V A Bankaitis
F J de Bruijn
K Szczyglowski
Michigan State University · US

Funding

Role of the Phospholipids in Golgi Secretory FunctionR01GM044530 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BANKAITIS, VYTAS A · 1991 to 2019
$5.6M
NIGMS NIH HHS GM44530NIGMS NIH HHS R01 GM044530
6 · The paper itself

Abstract

Phosphatidylinositol transfer proteins (PITPs) modulate signal transduction pathways and membrane-trafficking functions in eukaryotes. Here, we describe the characterization of a gene family from Lotus japonicus that encodes a novel class of plant PITP-like proteins (LjPLPs) and that is regulated in an unusual nodule-specific manner. Members of this gene family were identified based on their nucleotide sequence homology with a previously described cDNA, LjNOD16, which encodes the L. japonicus late nodulin Nlj16. Nlj16 or highly related amino acid sequences are shown to constitute C-terminal domains of LjPLPs and are suggested to function as specific plasma membrane targeting modules. The expression patterns of one member of this gene family (LjPLP-IV) revealed that LjNOD16 mRNA synthesis in nodules is the result of the transcriptional activity of a nodule-specific promoter located in an intron of the LjPLP-IV gene. This intron-borne bidirectional promoter also generates nodule-specific antisense transcripts derived from the N-terminal PITP domain coding region of the LjPLP-IV gene. We propose that Nlj16 protein synthesis and LjPLP-IV antisense transcript generation are components of an elaborate mechanism designed to control LjPLP synthesis and/or functioning in nodules.

Indexed as

Gene Expression Regulation, EnzymologicGene Expression Regulation, PlantMembrane ProteinsPlants, MedicinalSaccharomyces cerevisiae ProteinsAmino Acid SequenceAntisense Elements (Genetics)Base SequenceCarrier ProteinsCell MembraneDNA, PlantDown-RegulationFabaceaeIntronsMolecular Sequence DataNitrogen FixationAntisense Elements (Genetics)Carrier ProteinsDNA, PlantMembrane ProteinsNlj16 protein, Lotus corniculatusPhosphatidylinositol PhosphatesPhospholipid Transfer ProteinsPlant ProteinsRecombinant Fusion ProteinsRNA, MessengerRNA, PlantSaccharomyces cerevisiae ProteinsSEC24 protein, S cerevisiae

Identifiers

PMID11402166
PMCPMC135581
OpenAlexW2164166106

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.