Evidence map›Paper›PMID 11401989›Full record

ArticleInfection and immunity2001

Evidence of recombination in Porphyromonas gingivalis and random distribution of putative virulence markers.

E V Frandsen, K Poulsen, M A Curtis, M Kilian

Abstract read
In one paragraph

Article in Infection and immunity, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

  1. Article
  2. Exploring the Genetic and Functional Diversity ofInternational journal of molecular sciences · 2025
    Article
  3. Article
  4. Comparative analysis ofMicrobiology spectrum · 2024
    Article
  5. Prevalence and Phylogenetic Analysis of Lipoprotein-GeneAntibiotics (Basel, Switzerland) · 2023
    Article
  6. Article
  7. Review
  8. Review
  9. Phylogenetic diversity inJournal of oral microbiology · 2020
    Article
  10. Article
  11. Genetic exchange and reassignment inJournal of oral microbiology · 2018
    Review
  12. Immunoglobulin G antibodies againstJournal of oral microbiology · 2017
    Article
  13. Frontiers in microbiology · 2017
    Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Porphyromonas gingivalis fimbriae.Journal of oral microbiology · 2013
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

E V FrandsenDepartment of Oral Biology, Royal Dental College, Faculty of Health Sciences, University of Aarhus, DK-8000 Aarhus C, Denmark. ef@microbiology.au.dk
K Poulsen
M A Curtis
M Kilian

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The association of Porphyromonas gingivalis to periodontal disease is not clearly understood. Similar proportions of P. gingivalis may be cultivated from both inactive and actively degrading periodontal pockets. Differences in virulence among strains of P. gingivalis exist, but the molecular reason for this remains unknown. We examined the population structure of P. gingivalis to obtain a framework in which to study pathogenicity in relation to evolution. Phylogenetic trees derived from the sequencing of fragments of four housekeeping genes, ahp, thy, rmlB, and infB, in 57 strains were completely different with no correlation between clustering of strains in the four dendrograms. Combining the various alleles of the four gene fragments sequenced resulted in 41 different sequence types. The index of association, I(A), based on a single representative of each sequence type was 0.143 +/- 0.202, indicating a population at linkage equilibrium. Inclusion of all isolates for the calculation of I(A) resulted in a value of 0.206 +/- 0.171. This suggests an epidemic population structure supported by the finding of genetically identical strains in different parts of the world. We observed a random distribution of two virulence-associated mobile genetic elements, the ragB locus and the insertion sequence IS1598, among 132 strains tested. In conclusion, P. gingivalis has a nonclonal population structure characterized by frequent recombination. Our study suggests that particular genotypes, possibly with increased pathogenic potential, may spread successfully in the human population.

Indexed as

Bacterial ProteinsRecombination, GeneticBiomarkersDNA, BacterialDNA Transposable ElementsEukaryotic Initiation Factor-2HumansHydro-LyasesMonomeric GTP-Binding ProteinsPeroxidasesPeroxiredoxinsPhylogenyPorphyromonas gingivalisThymidylate SynthaseVirulenceBacterial ProteinsBiomarkersDNA, BacterialDNA Transposable ElementsdTDPglucose 4,6-dehydrataseEukaryotic Initiation Factor-2Hydro-LyasesMonomeric GTP-Binding ProteinsPeroxidasesPeroxiredoxinsRagB protein, bacteriaThymidylate Synthase

Identifiers

PMID11401989
PMCPMC98522

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.