Evidence map›Paper›PMID 11390607›Full record

ArticleJournal of virology2001

Trypsin cleavage stabilizes the rotavirus VP4 spike.

S E Crawford, S K Mukherjee, M K Estes, J A Lawton, A L Shaw, R F Ramig, B V Prasad

Abstract read
In one paragraph

Article in Journal of virology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed.

  1. Article
  2. Article
  3. Frontiers in microbiology · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Nonlytic Egress and Transmission in the Virus World.Annual review of biochemistry · 2025
    Review
  9. Review
  10. Article
  11. Review
  12. Review
  13. Review
  14. Article
  15. Viral Capsid and Polymerase in Reoviridae.Sub-cellular biochemistry · 2022
    Article
  16. Review
  17. Article
  18. Article
  19. Review
  20. Article

14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

S E CrawfordDepartment of Molecular Virology and Microbiology, Baylor College of Medicine, One Baylor Plaza, Houston, TX 77030, USA.
S K Mukherjee
M K Estes
J A Lawton
A L Shaw
R F Ramig
B V Prasad

Funding

Structural Studies on RotavirusesR37AI036040 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI PRASAD, BIDADI VENKATARAM · 2003 to 2022
$10.9M
STRUCTURAL STUDIES ON ROTAVIRUSESR01AI036040 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI Bidadi Venkataram Prasad · 1994 to 2026
$4.3M
MOLECULAR BIOLOGY OF THE ROTAVIRUSESR01DK030144 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI ESTES, MARY KOLB · 1986 to 2005
$2.2M
GENETICS OF THE ROTAVIRUSESR01AI016687 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI RAMIG, ROBERT FRANKLIN · 1989 to 2002
$814k
Molecular Biology of the RotavirusesR56DK030144 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI ESTES, MARY KOLB · 2006 to 2007
$443k
GENETICS OF THE ROTAVIRUSESR22AI016687 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI RAMIG, ROBERT FRANKLIN · 1985 to 1991
–
NIAID NIH HHS AI 16687NIAID NIH HHS R01 AI016687NIAID NIH HHS R01 AI036040NIAID NIH HHS R37 AI036040NIDDK NIH HHS DK 30144NIDDK NIH HHS R01 DK030144NIDDK NIH HHS R56 DK030144
6 · The paper itself

Abstract

Trypsin enhances rotavirus infectivity by an unknown mechanism. To examine the structural basis of trypsin-enhanced infectivity in rotaviruses, SA11 4F triple-layered particles (TLPs) grown in the absence (nontrypsinized rotavirus [NTR]) or presence (trypsinized rotavirus [TR]) of trypsin were characterized to determine the structure, the protein composition, and the infectivity of the particles before and after trypsin treatment. As expected, VP4 was not cleaved in NTR particles and was cleaved into VP5(*) and VP8(*) in TR particles. However, surprisingly, while the VP4 spikes were clearly visible and well ordered in the electron cryomicroscopy reconstructions of TR TLPs, they were totally absent in the reconstructions of NTR TLPs. Biochemical analysis with radiolabeled particles indicated that the stoichiometry of the VP4 in NTR particles was the same as that in TR particles and that the VP8(*) portion of NTR, but not TR, particles is susceptible to further proteolysis by trypsin. Taken together, these structural and biochemical data show that the VP4 spikes in the NTR TLPs are icosahedrally disordered and that they are conformationally different. Structural studies on the NTR TLPs after trypsin treatment showed that spike structure could be partially recovered. Following additional trypsin treatment, infectivity was enhanced for both NTR and TR particles, but the infectivity of NTR remained 2 logs lower than that of TR particles. Increased infectivity in these particles corresponded to additional cleavages in VP5(*), at amino acids 259, 583, and putatively 467, which are conserved in all P serotypes of human and animal group A rotaviruses and also corresponded with a structural change in VP7. These biochemical and structural results show that trypsin cleavage imparts order to VP4 spikes on de novo synthesized virus particles, and these ordered spikes make virus entry into cells more efficient.

Indexed as

Capsid ProteinsAmino Acid SequenceAnimalsCapsidChlorocebus aethiopsMicroscopy, ElectronRotavirusTrypsinCapsid ProteinsTrypsinVP4 protein, Rotavirus

Identifiers

PMID11390607
PMCPMC114321

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.