Evidence map›Paper›PMID 11371365›Full record

ArticleImmunity2001

The translesion DNA polymerase zeta plays a major role in Ig and bcl-6 somatic hypermutation.

H Zan, A Komori, Z Li, A Cerutti, A Schaffer, M F Flajnik, M Diaz, P Casali

Open access · bronzeAbstract read
In one paragraph

Article in Immunity, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
10.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed, 205 citations in OpenAlex.

  1. Review
  2. Review
  3. A high-resolution landscape of mutations in theProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Translesion DNA synthesis and mutagenesis in eukaryotes.Cold Spring Harbor perspectives in biology · 2013
    Review
  12. Article
  13. Article
  14. Article
  15. Mismatch-mediated error prone repair at the immunoglobulin genes.Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie · 2011
    Review
  16. Article
  17. Article
  18. Article
  19. AID and somatic hypermutation.Advances in immunology · 2010
    Review
  20. Article

15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

H ZanDivision of Molecular Immunology, Department of Pathology, Cornell University Weill Medical College, New York, NY 10021, USA.
A Komori
Z Li
A Cerutti
A Schaffer
M F Flajnik
M Diaz
P Casali
Cornell University · USScripps Research Institute · USUniversity of Maryland, Baltimore · US

Funding

Immunoglobulin class switch DNA recombinationR01AI045011 · NIAID · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI CASALI, PAOLO · 2000 to 2011
$3.8M
SOMATIC HYPERMUTATION IN HUMAN B CELLSR01AR040908 · NIAMS · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI CASALI, PAOLO · 1992 to 2005
$1.8M
AGING--ANTIBODY RESPONSE TO BACTERIAL AND VIRAL AGSR01AG013910 · NIA · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI CASALI, PAOLO · 1997 to 2001
$687k
Immunoglobulin class switch DNA recombinationR56AI045011 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI CASALI, PAOLO · 2012 to 2012
$523k
NIAID NIH HHS AI 45011NIAID NIH HHS R01 AI045011NIAID NIH HHS R56 AI045011NIAMS NIH HHS AR 40908NIAMS NIH HHS R01 AR040908NIA NIH HHS AG 13910
6 · The paper itself

Abstract

Ig somatic mutations would be introduced by a polymerase (pol) while repairing DNA outside main DNA replication. We show that human B cells constitutively express the translesion pol zeta, which effectively extends DNA past mismatched bases (mispair extender), and pol eta, which bypasses DNA lesions in an error-free fashion. Upon B cell receptor (BCR) engagement and coculture with activated CD4+ T cells, these lymphocytes upregulated pol zeta, downregulated pol eta, and mutated the Ig and bcl-6 genes. Inhibition of the pol zeta REV3 catalytic subunit by specific phosphorothioate-modified oligonucleotides impaired Ig and bcl-6 hypermutation and UV damage-induced DNA mutagenesis, without affecting cell cycle or viability. Thus, pol zeta plays a critical role in Ig and bcl-6 hypermutation, perhaps facilitated by the downregulation of pol eta.

Indexed as

MutagenesisB-LymphocytesCell LineDNA-Binding ProteinsDNA DamageDNA-Directed DNA PolymeraseDown-RegulationHumansImmunoglobulin Heavy ChainsImmunoglobulin Joining RegionImmunoglobulinsImmunoglobulin Variable RegionProto-Oncogene ProteinsProto-Oncogene Proteins c-bcl-6Time FactorsTranscription FactorsDNA-Binding ProteinsDNA-Directed DNA PolymeraseDNA polymerase zetaImmunoglobulin Heavy ChainsImmunoglobulin Joining RegionImmunoglobulinsImmunoglobulin Variable RegionProto-Oncogene ProteinsProto-Oncogene Proteins c-bcl-6Rad30 proteinTranscription FactorsY-Family DNA Polymerases

Identifiers

PMID11371365
PMCPMC4632985
OpenAlexW2145836514

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.