Evidence map›Paper›PMID 11358864›Full record

ArticleGenes & development2001

Using viral species specificity to define a critical protein/RNA interaction surface.

G A Coburn, H L Wiegand, Y Kang, D N Ho, M M Georgiadis, B R Cullen

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 25 citations in OpenAlex.

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  13. The crystal structure and mutational analysis of a novel RNA-binding domain found in the human Tap nuclear mRNA export factor.Proceedings of the National Academy of Sciences of the United States of America · 2002
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

G A CoburnHoward Hughes Medical Institute, Duke University Medical Center, Durham, North Carolina 27710, USA.
H L Wiegand
Y Kang
D N Ho
M M Georgiadis
B R Cullen
Rutgers, The State University of New Jersey · USDuke Medical Center · USHoward Hughes Medical Institute · US

Funding

Structural studies of protein-nucleic acid interactionsR01GM055026 · NIGMS · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI GEORGIADIS, MILLIE M · 1997 to 2005
$1.5M
TRAINING GRANT IN MOLECULAR BIOPHYSICST32GM008319 · NIGMS · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI OLSON, WILMA K · 1989 to 2003
$644k
NIGMS NIH HHS GM08319NIGMS NIH HHS R01 GM055026NIGMS NIH HHS R01 GM55026NIGMS NIH HHS T32 GM008319
6 · The paper itself

Abstract

The Tap protein mediates the sequence-specific nuclear export of mRNAs bearing the retroviral constitutive transport element (CTE) and also plays a critical role in the sequence nonspecific export of cellular mRNAs. Previously, we have demonstrated that CTE function displays species specificity, that is, the CTE functions in human but not quail cells. Here, we demonstrate that quail Tap fails to support CTE function because it cannot bind the CTE. However, changing a single residue in quail Tap, glutamine 246, to arginine, the residue found in human Tap, rescues both CTE function and CTE binding. This residue, which is located on the exterior of a recently reported molecular structure of Tap, defines a surface on Tap that is critical for CTE binding. These data emphasize the potential importance of cross-species genetic complementation in the identification and characterization of cellular factors that are critical for different aspects of viral replication.

Indexed as

Amino Acid SequenceAmino Acid SubstitutionAnimalsATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily B, Member 2Blotting, WesternCell LineGenetic Complementation TestHumansMason-Pfizer monkey virusModels, MolecularMolecular Sequence DataProtein BindingProtein Structure, TertiaryQuailRecombinant Fusion ProteinsATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily B, Member 2Recombinant Fusion ProteinsRNA, MessengerTAP1 protein, human

Identifiers

PMID11358864
PMCPMC313802
OpenAlexW2109635867

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.