Evidence map›Paper›PMID 11333221›Full record

ArticleGenetics2001

Saccharomyces cerevisiae SMT4 encodes an evolutionarily conserved protease with a role in chromosome condensation regulation.

A V Strunnikov, L Aravind, E V Koonin

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 123 citations in OpenAlex.

  1. Article
  2. Review
  3. Multifaceted roles of SUMO in DNA metabolism.Nucleus (Austin, Tex.) · 2024
    Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. SUMO Chains Rule on Chromatin Occupancy.Frontiers in cell and developmental biology · 2019
    Review
  9. Article
  10. Article
  11. The SUMO Pathway in Mitosis.Advances in experimental medicine and biology · 2017
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

A V StrunnikovNational Institute of Child Health and Human Development, National Library of Medicine, National Institutes of Health, Bethesda, MD 20892, USA. strunnik@box-s.nih.gov
L Aravind
E V Koonin
Health and Human Development (2HD) Research Network · CMNational Center for Biotechnology Information · USNational Institutes of Health · US

Funding

SMC PROTEINS AND OTHER CHROMOSOMAL PROTEINS IN MITOTIC CHROMOSOME SEGREGATIONZ01HD001903 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI STRUNNIKOV, ALEXANDER · 1996 to 2008
$1.3M
6 · The paper itself

Abstract

In a search for regulatory genes affecting the targeting of the condensin complex to chromatin in Saccharomyces cerevisiae, we identified a member of the adenovirus protease family, SMT4. SMT4 overexpression suppresses the temperature-sensitive conditional lethal phenotype of smc2-6, but not smc2-8 or smc4-1. A disruption allele of SMT4 has a prominent chromosome phenotype: impaired targeting of Smc4p-GFP to rDNA chromatin. Site-specific mutagenesis of the predicted protease active site cysteine and histidine residues of Smt4p abolishes the SMT4 function in vivo. The previously uncharacterized SIZ1 (SAP and Miz) gene, which encodes a protein containing a predicted DNA-binding SAP module and a Miz finger, is identified as a bypass suppressor of the growth defect associated with the SMT4 disruption. The SIZ1 gene disruption is synthetically lethal with the SIZ2 deletion. We propose that SMT4, SIZ1, and SIZ2 are involved in a novel pathway of chromosome maintenance.

Indexed as

Chromosomes, FungalEvolution, MolecularSaccharomyces cerevisiae ProteinsAmino Acid SequenceBase SequenceConserved SequenceDNA, RibosomalEndopeptidasesGene DeletionGenes, LethalMitosisMolecular Sequence DataMutagenesis, Site-DirectedSaccharomyces cerevisiaeSequence Homology, Amino AcidDNA, RibosomalEndopeptidasesSaccharomyces cerevisiae ProteinsULP2 protein, S cerevisiae

Identifiers

PMID11333221
PMCPMC1461644
OpenAlexW1951655399

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.