Evidence map›Paper›PMID 11333025›Full record

ArticleRNA (New York, N.Y.)2001

Purification of Drosophila snRNPs and characterization of two populations of functional U1 particles.

E Labourier, D C Rio

Abstract read
In one paragraph

Article in RNA (New York, N.Y.), 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

E LabourierDepartment of Molecular and Cell Biology, University of California, Berkeley 94720-3204, USA.
D C Rio

Funding

BIOCHEMISTRY OF REGULATED PRE-MRNA SPLICING/DROSOPHILAR01HD028063 · NICHD · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI RIO, DONALD C · 1991 to 1999
–
NICHD NIH HHS R01HD28063
6 · The paper itself

Abstract

U1 snRNP is required at an early stage during assembly of the spliceosome, the dynamic ribonucleoprotein (RNP) complex that performs nuclear pre-mRNA splicing. Here, we report the purification of U1 snRNP particles from Drosophila nuclear extracts and the characterization of their biochemical properties, polypeptide contents, and splicing activities. On the basis of their antigenicity, apparent molecular weight, and by peptide sequencing, the Drosophila 70K, SNF, B, U1-C, D1, D2, D3, E, F, and G proteins are shown to be integral components of these particles. Sequence database searches revealed that both the U1-specific and the Sm proteins are extensively conserved between human and Drosophila snRNPs. Furthermore, both species possess a conserved intrinsic U1-associated kinase activity with identical substrate specificity in vitro. Finally, our results demonstrate that a second type of functional U1 particle, completely lacking the U1/U2-specific protein SNF and the associated protein kinase activity, can be isolated from cultured Kc cell or Canton S embryonic nuclear extracts. This work describes the first characterization of a purified Drosophila snRNP particle and reinforces the view that their activity and composition, with the exception of the atypical bifunctional U1-A/U2-B" SNF protein, are highly conserved in metazoans.

Indexed as

RNA SplicingAmino Acid SequenceAnimalsCell NucleusConserved SequenceDrosophilaGuanosineMolecular Sequence DataNuclear ProteinsProtein Serine-Threonine KinasesRibonucleoproteins, Small NuclearRibonucleoprotein, U1 Small NuclearRNA-Binding ProteinsRNA CapsSequence Homology, Amino AcidSerine-Arginine Splicing FactorsGuanosineN(2),N(2),7-trimethylguanosineNuclear ProteinsProtein Serine-Threonine KinasesRibonucleoproteins, Small NuclearRibonucleoprotein, U1 Small NuclearRNA-Binding ProteinsRNA CapsSerine-Arginine Splicing FactorsSNRNP70 protein, human

Identifiers

PMID11333025
PMCPMC1370101

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.