Evidence map›Paper›PMID 11323671›Full record

ArticleNature2001

The highly reduced genome of an enslaved algal nucleus.

S Douglas, S Zauner, M Fraunholz, M Beaton, S Penny, L T Deng, X Wu, M Reith, T Cavalier-Smith, U G Maier

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in Nature, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 142 papers.

0numbers the graph read from it
0cells of the map it votes in
142citing papers in PubMed
12.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

142 citing papers in PubMed, 453 citations in OpenAlex.

  1. Article
  2. How to upgrade stolen organelles into permanent plastids: A comparative transcriptomic perspective.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. Review
  4. Review
  5. Review
  6. Endosymbiosis in Nature and the Gut-Brain Axis.Advances in experimental medicine and biology · 2023
    Article
  7. Article
  8. Article
  9. Kinetochore Architecture Employs Diverse Linker Strategies Across Evolution.Frontiers in cell and developmental biology · 2022
    Review
  10. Article
  11. Article
  12. Article
  13. Dinoflagellates with relic endosymbiont nuclei as models for elucidating organellogenesis.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  14. Article
  15. Article
  16. Relative Mutation Rates in Nucleomorph-Bearing Algae.Genome biology and evolution · 2019
    Article
  17. Article
  18. Article
  19. Article
  20. Article

82 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 4 countries.

S DouglasNational Research Council of Canada Institute for Marine Biosciences and Program in Evolutionary Biology, Canadian Institute of Advanced Research, 1411 Oxford Street, Halifax, Nova Scotia B3H 3ZI, Canada.
S Zauner
M Fraunholz
M Beaton
S Penny
L T Deng
X Wu
M Reith
T Cavalier-Smith
U G Maier
Institute for Marine Biosciences · CAPhilipps University of Marburg · DEUniversity of British Columbia · CACanadian Institute for Advanced Research · CAMount Allison University · CAPhiladelphia University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chromophyte algae differ fundamentally from plants in possessing chloroplasts that contain chlorophyll c and that have a more complex bounding-membrane topology. Although chromophytes are known to be evolutionary chimaeras of a red alga and a non-photosynthetic host, which gave rise to their exceptional membrane complexity, their cell biology is poorly understood. Cryptomonads are the only chromophytes that still retain the enslaved red algal nucleus as a minute nucleomorph. Here we report complete sequences for all three nucleomorph chromosomes from the cryptomonad Guillardia theta. This tiny 551-kilobase eukaryotic genome is the most gene-dense known, with only 17 diminutive spliceosomal introns and 44 overlapping genes. Marked evolutionary compaction hundreds of millions of years ago eliminated nearly all the nucleomorph genes for metabolic functions, but left 30 for chloroplast-located proteins. To allow expression of these proteins, nucleomorphs retain hundreds of genetic-housekeeping genes. Nucleomorph DNA replication and periplastid protein synthesis require the import of many nuclear gene products across endoplasmic reticulum and periplastid membranes. The chromosomes have centromeres, but possibly only one loop domain, offering a means for studying eukaryotic chromosome replication, segregation and evolution.

Indexed as

GenomeBase SequenceCell NucleusChloroplastsChromosome MappingCyanobacteriaEukaryotaMolecular Sequence DataRhodophytaSequence Analysis, DNASymbiosis

Identifiers

PMID11323671
OpenAlexW1582655487

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.