Evidence map›Paper›PMID 11313942›Full record

ArticleOncogene2001

PRCC, the commonest TFE3 fusion partner in papillary renal carcinoma is associated with pre-mRNA splicing factors.

Y M Skalsky, P M Ajuh, C Parker, A I Lamond, G Goodwin, C S Cooper

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in Oncogene, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 69 citations in OpenAlex.

  1. Review
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  15. Review
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  17. Translocations in epithelial cancers.Biochimica et biophysica acta · 2009
    Review
  18. Article
  19. Article
  20. Molecular anatomy of a speckle.The anatomical record. Part A, Discoveries in molecular, cellular, and evolutionary biology · 2006
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Y M SkalskyInstitute of Cancer Research, Molecular Carcinogenesis Section, The Haddow Laboratories, 15 Cotswold Road, Sutton, Surrey, SM2 5NG, UK.
P M Ajuh
C Parker
A I Lamond
G Goodwin
C S Cooper
Institute of Cancer Research · GBUniversity of Dundee · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In papillary renal cell carcinomas the TFE3 transcription factor becomes fused to the PSF and NonO pre-mRNA splicing factors and most commonly to a protein of unknown function designated PRCC. In this study we have examined the ability of the resulting PRCC-TFE3 and NonO-TFE3 fusions to activate transcription from the plasminogen activator inhibitor-1 (PAI-1) promoter. The results show that only fusion to PRCC enhanced transcriptional activation, indicating that the ability to enhance the level of transcription from endogenous TFE3 promoters is not a consistent feature of TFE3 fusions. In investigations of the normal function of PRCC we observed that PRCC expressed as a green fluorescent fusion protein colocalizes within the nucleus with Sm pre-mRNA splicing factors. It was also found that endogenous PRCC is coimmunoprecipitated by antibodies that recognize a variety of pre-mRNA splicing factors including SC35, PRL1 and CDC5. Association with the cellular splicing machinery is therefore, a common feature of the proteins that become fused to TFE3 in papillary renal cell carcinomas.

Indexed as

Cell Cycle ProteinsLuminescent ProteinsNeoplasm ProteinsRibonucleoproteinsSaccharomyces cerevisiae ProteinsAdultAmanitinsAnimalsArtificial Gene FusionBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsCarcinoma, PapillaryCarcinoma, Renal CellDNA-Binding ProteinsEnzyme InhibitorsFemaleGreen Fluorescent ProteinsAmanitinsBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsCDC5 protein, S cerevisiaeCell Cycle ProteinsDNA-Binding ProteinsEnzyme InhibitorsGreen Fluorescent ProteinsLuminescent ProteinsNeoplasm ProteinsNuclear ProteinsPRCC protein, humanProtein KinasesProteinsProtein Serine-Threonine KinasesRecombinant Fusion ProteinsRibonucleoproteinsRibonucleoproteins, Small NuclearRNA, MessengerRNA PrecursorsSaccharomyces cerevisiae ProteinsSerine-Arginine Splicing FactorsSRSF2 protein, humanTFE3 protein, humanTranscription Factors

Identifiers

PMID11313942
OpenAlexW2159435989

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.