Evidence map›Paper›PMID 11302803›Full record

ArticleAntimicrobial agents and chemotherapy2001

Drug targeting Mycobacterium tuberculosis cell wall synthesis: genetics of dTDP-rhamnose synthetic enzymes and development of a microtiter plate-based screen for inhibitors of conversion of dTDP-glucose to dTDP-rhamnose.

Y Ma, R J Stern, M S Scherman, V D Vissa, W Yan, V C Jones, F Zhang, S G Franzblau, W H Lewis, M R McNeil

Open access · greenAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 150 citations in OpenAlex.

  1. Genome-wide transcriptional landscape ofFrontiers in immunology · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Frontiers in microbiology · 2021
    Article
  6. Pangenome Analysis ofAntibiotics (Basel, Switzerland) · 2020
    Article
  7. Article
  8. Discovery of an RmlC/D fusion protein in the microalgaThe Journal of biological chemistry · 2019
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. The Mycobacterial Cell Wall--Peptidoglycan and Arabinogalactan.Cold Spring Harbor perspectives in medicine · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Y MaDepartment of Microbiology, Colorado State University, Fort Collins, Colorado 80523, USA.
R J Stern
M S Scherman
V D Vissa
W Yan
V C Jones
F Zhang
S G Franzblau
W H Lewis
M R McNeil
Colorado State University · USUniversity of Illinois Chicago · USWashington University in St. Louis · US

Funding

CELL WALL BIOGENESIS: TARGET FOR NEW ANTI-TB DRUGSR01AI033706 · NIAID · COLORADO STATE UNIVERSITY-FORT COLLINS · PI MCNEIL, MICHAEL R · 1992 to 2006
$2.5M
TB DRUGS VIA INHIBITORS OF CELL WALL SYNTHETIC ENZYMESP01AI046393 · NIAID · COLORADO STATE UNIVERSITY-FORT COLLINS · PI BRENNAN, PATRICK JOSEPH · 1999 to 2002
$2.2M
SYNTHESIS OF INHIBITORS OF RHAMNOSE AND GALACTOSE METABOLISMU19AI040972 · NIAID · NATIONAL JEWISH HEALTH · PI WELCH, J · 1996 to 2000
$74k
NIAID NIH HHS AI-33706NIAID NIH HHS AI 40972NIAID NIH HHS P01 AI046393NIAID NIH HHS P01 AI 46393NIAID NIH HHS R01 AI033706
6 · The paper itself

Abstract

An L-rhamnosyl residue plays an essential structural role in the cell wall of Mycobacterium tuberculosis. Therefore, the four enzymes (RmlA to RmlD) that form dTDP-rhamnose from dTTP and glucose-1-phosphate are important targets for the development of new tuberculosis therapeutics. M. tuberculosis genes encoding RmlA, RmlC, and RmlD have been identified and expressed in Escherichia coli. It is shown here that genes for only one isotype each of RmlA to RmlD are present in the M. tuberculosis genome. The gene for RmlB is Rv3464. Rv3264c was shown to encode ManB, not a second isotype of RmlA. Using recombinant RmlB, -C, and -D enzymes, a microtiter plate assay was developed to screen for inhibitors of the formation of dTDP-rhamnose. The three enzymes were incubated with dTDP-glucose and NADPH to form dTDP-rhamnose and NADP(+) with a concomitant decrease in optical density at 340 nm (OD(340)). Inhibitor candidates were monitored for their ability to lower the rate of OD(340) change. To test the robustness and practicality of the assay, a chemical library of 8,000 compounds was screened. Eleven inhibitors active at 10 microM were identified; four of these showed activities against whole M. tuberculosis cells, with MICs from 128 to 16 microg/ml. A rhodanine structural motif was present in three of the enzyme inhibitors, and two of these showed activity against whole M. tuberculosis cells. The enzyme assay was used to screen 60 Peruvian plant extracts known to inhibit the growth of M. tuberculosis in culture; two extracts were active inhibitors in the enzyme assay at concentrations of less than 2 microg/ml.

Indexed as

Bacterial ProteinsCarbohydrate DehydrogenasesCarbohydrate EpimerasesCell WallEnzyme InhibitorsGenome, BacterialGlucoseHydro-LyasesMycobacterium lepraeMycobacterium tuberculosisNucleoside Diphosphate SugarsNucleotidyltransferasesThymine NucleotidesBacterial ProteinsCarbohydrate DehydrogenasesCarbohydrate Epimerasesdeoxythymidine diphosphate-glucosedTDP-4-dehydrorhamnose reductasedTDP-4-ketorhamnose 3,5-epimerasedTDPglucose 4,6-dehydrataseEnzyme InhibitorsGlucoseglucose-1-phosphate thymidylyltransferaseHydro-LyasesNucleoside Diphosphate SugarsNucleotidyltransferasesthymidine diphosphate rhamnoseThymine Nucleotides

Identifiers

PMID11302803
PMCPMC90481
OpenAlexW2109670638

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.