Evidence map›Paper›PMID 11290707›Full record

ArticleGenetics2001

The DNA binding protein Rfg1 is a repressor of filamentation in Candida albicans.

R A Khalaf, R S Zitomer

Abstract read
In one paragraph

Article in Genetics, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 96 citations in OpenAlex.

  1. Mar1, a high mobility group box protein, regulatesApplied and environmental microbiology · 2024
    Article
  2. Article
  3. Article
  4. Loss-of-FunctionmSphere · 2021
    Article
  5. The Roles of Chromatin Accessibility in Regulating theJournal of fungi (Basel, Switzerland) · 2021
    Review
  6. Mechanism of Candida pathogenesis: revisiting the vital drivers.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2020
    Review
  7. Review
  8. Multi-omics Signature ofmSystems · 2019
    Article
  9. Review
  10. Article
  11. Frontiers in medicine · 2018
    Review
  12. Ras signalling in pathogenic yeasts.Microbial cell (Graz, Austria) · 2017
    Review
  13. Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

R A KhalafDepartment of Biological Sciences, University at Albany/State University of New York, Albany, New York 12222, USA.
R S Zitomer
Albany State University · USUniversity at Albany, State University of New York · US

Funding

The Hypoxic and General Stress Responses in YeastR01GM026061 · NIGMS · STATE UNIVERSITY OF NEW YORK AT ALBANY · PI ZITOMER, RICHARD S · 1985 to 2004
$1.3M
NIGMS NIH HHS GM-26061
6 · The paper itself

Abstract

We have identified a repressor of hyphal growth in the pathogenic yeast Candida albicans. The gene was originally cloned in an attempt to characterize the homologue of the Saccharomyces cerevisiae Rox1, a repressor of hypoxic genes. Rox1 is an HMG-domain, DNA binding protein with a repression domain that recruits the Tup1/Ssn6 general repression complex to achieve repression. The C. albicans clone also encoded an HMG protein that was capable of repression of a hypoxic gene in a S. cerevisiae rox1 deletion strain. Gel retardation experiments using the purified HMG domain of this protein demonstrated that it was capable of binding specifically to a S. cerevisiae hypoxic operator DNA sequence. These data seemed to indicate that this gene encoded a hypoxic repressor. However, surprisingly, when a homozygous deletion was generated in C. albicans, the cells became constitutive for hyphal growth. This phenotype was rescued by the reintroduction of the wild-type gene on a plasmid, proving that the hyphal growth phenotype was due to the deletion and not a secondary mutation. Furthermore, oxygen repression of the hypoxic HEM13 gene was not affected by the deletion nor was this putative ROX1 gene regulated positively by oxygen as is the case for the S. cerevisiae gene. All these data indicate that this gene, now designated RFG1 for Repressor of Filamentous Growth, is a repressor of genes required for hyphal growth and not a hypoxic repressor.

Indexed as

Nuclear ProteinsSaccharomyces cerevisiae ProteinsAmino Acid SequenceCandida albicansCloning, MolecularDNA-Binding ProteinsFungal ProteinsGene Expression Regulation, FungalMolecular Sequence DataOxygenRepressor ProteinsSaccharomyces cerevisiaeTranscription FactorsDNA-Binding ProteinsFungal ProteinsMOT3 protein, S cerevisiaeNuclear ProteinsOxygenRepressor ProteinsRFG1 protein, Candida albicansROX1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsTranscription FactorsTUP1 protein, S cerevisiae

Identifiers

PMID11290707
PMCPMC1461606
OpenAlexW1915890538

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.