Evidence map›Paper›PMID 11287613›Full record

ArticleMolecular and cellular biology2001

Role of NF-Y in in vivo regulation of the gamma-globin gene.

Z Duan, G Stamatoyannopoulos, Q Li

Abstract read
In one paragraph

Article in Molecular and cellular biology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Z DuanDivision of Medical Genetics, Department of Medicine, University of Washington, Seattle, Washington 98195, USA.
G Stamatoyannopoulos
Q Li

Funding

MOLECULAR CONTROL OF GLOBIN GENE SWITCHINGR37DK045365 · NIDDK · UNIVERSITY OF WASHINGTON · PI STAMATOYANNOPOULOS, GEORGE · 1998 to 2006
$3.8M
CELLULAR MECHANISMS OF HB F REGULATIONR01HL020899 · NHLBI · UNIVERSITY OF WASHINGTON · PI STAMATOYANNOPOULOS, GEORGE · 1985 to 2007
$3.6M
MOLECULAR CONTROL OF HUMAN GLOBIN GENE SWITCHINGR01DK045365 · NIDDK · UNIVERSITY OF WASHINGTON · PI STAMATOYANNOPOULOS, GEORGE · 1992 to 2011
$1.6M
Globin Gene Switching: Molecular ControlR56DK045365 · NIDDK · UNIVERSITY OF WASHINGTON · PI STAMATOYANNOPOULOS, GEORGE · 2007 to 2007
$78k
CELLULAR MECHANISMS OF HG F REGULATIONR37HL020899 · NHLBI · UNIVERSITY OF WASHINGTON · PI STAMATOYANNOPOULOS, GEORGE · 1987 to 1996
–
NHLBI NIH HHS HL20899NHLBI NIH HHS R01 HL020899NIDDK NIH HHS DK45365NIDDK NIH HHS R01 DK045365NIDDK NIH HHS R37 DK045365NIDDK NIH HHS R56 DK045365
6 · The paper itself

Abstract

The duplicated CCAAT box is required for gamma gene expression. We report here that the transcriptional factor NF-Y is recruited to the duplicated CCAAT box in vivo. A mutation of the duplicated CCAAT box that severely disrupts the NF-Y binding also reduces the accessibility level of the gamma gene promoter, affects the assembly of basal transcriptional machinery, and increases the recruitment of GATA-1 to the locus control region (LCR) and the proximal promoter and the recruitment of transcription cofactor CBP/p300 to the LCR. These findings suggest that recruitment of NF-Y to the duplicated CCAAT box plays a role in the chromatin opening of the gamma gene promoter as well as in the communication between the gamma gene promoter and the LCR.

Indexed as

Gene Expression RegulationAnimalsCCAAT-Binding FactorChromatinGlobinsHL-60 CellsHumansK562 CellsLocus Control RegionMicePromoter Regions, GeneticTranscription, GeneticTumor Cells, CulturedCCAAT-Binding FactorChromatinGlobins

Identifiers

PMID11287613
PMCPMC86936

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.