Evidence map›Paper›PMID 11287587›Full record

ArticleJournal of virology2001

Enhancer and long-term expression functions of herpes simplex virus type 1 latency-associated promoter are both located in the same region.

H Berthomme, J Thomas, P Texier, A Epstein, L T Feldman

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In one paragraph

Article in Journal of virology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.2field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

H BerthommeCentre de Génétique Moléculaire et Cellulaire, UMR5534 CNRS, Université Claude Bernard Lyon I, Villeurbanne, France.
J Thomas
P Texier
A Epstein
L T Feldman
Université Claude Bernard Lyon 1 · FRCentre de Génétique Moléculaire · FRCentre National de la Recherche Scientifique · FRUniversity of California, Los Angeles · US

Funding

HSV-1 GENE EXPRESSION IN LATENTLY INFECTED NEURONSR01AI028338 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI FELDMAN, LAWRENCE T · 1989 to 2000
$252k
NIAID NIH HHS AI28338
6 · The paper itself

Abstract

During herpes simplex virus type 1 (HSV-1) latent infection in vivo, the latency-associated promoter (LAP) is the only promoter to remain highly active long term. In a previous attempt to characterize LAP activity in vitro and in a mouse model, we showed that a 1.5-kb fragment called the long-term expression element (LTE), located immediately downstream from the transcriptional start site of LAP, was able to (i) increase gene expression in an orientation-independent manner, regardless of the cell type or the promoter used in vitro (enhancer activity) and (ii) keep LAP active during latency in vivo (long-term expression activity) (H. Berthomme, J. Lokensgard, L. Yang, T. Margolis, and L. T. Feldman, J. Virol. 74:3613-3622, 2000). To determine if these two functions could be separated genetically, we conducted a mutational analysis on the LTE and analyzed the effect on the LAP-LTE properties in both transient expression in cell culture and mouse dorsal root ganglia lytic and latent infection. In this report, we show that the first half of the LTE sequence, corresponding to the region previously described as LAP2 or exon1, encodes the enhancer function. This same region is also required to keep the LAP active during latency. These results exclude the intron region as containing any significant enhancer activity or any ability to keep the LAP active during latency. The results also show that these two functions have not been separated, leaving open the possibility that there is no long-term expression function per se but that the enhancer itself may function to keep the LAP active during latency by raising the level of expression to a detectable one. Further mutational analysis will be required to determine if these two potential functions continue to cosegregate.

Indexed as

Enhancer Elements, GeneticGenes, ViralPromoter Regions, GeneticVirus LatencyAnimalsCell LineChromosome MappingCricetinaeGene ExpressionHerpesvirus 1, HumanHumansMiceMice, Inbred BALB C

Identifiers

PMID11287587
PMCPMC114183
OpenAlexW2166001124

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.