Evidence map›Paper›PMID 11287581›Full record

ArticleJournal of virology2001

Global impact of influenza virus on cellular pathways is mediated by both replication-dependent and -independent events.

G K Geiss, M C An, R E Bumgarner, E Hammersmark, D Cunningham, M G Katze

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 118 citations in OpenAlex.

  1. Article
  2. Pathway expression analysis.Scientific reports · 2022
    Article
  3. Attenuated Viral Replication of AvianMicrobiology spectrum · 2022
    Article
  4. Article
  5. Article
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  11. Review
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  15. Review
  16. Article
  17. Article
  18. Article
  19. Host gene targets for novel influenza therapies elucidated by high-throughput RNA interference screens.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2012
    Review
  20. Article

2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

G K GeissDepartment of Microbiology, School of Medicine, University of Washington, Seattle 98195, USA. geiss@u.washington.edu
M C An
R E Bumgarner
E Hammersmark
D Cunningham
M G Katze
University of Washington · US

Funding

YILMA SIV VACCINIA VACCINE TRIALP51RR000166 · NCRR · UNIVERSITY OF WASHINGTON · PI HU, SHIU-LOK · 1985 to 2011
$161.1M
TRANSLATION CONTROL OF INFLUENZA VIRUS INFECTED CELLSR01AI022646 · NIAID · UNIVERSITY OF WASHINGTON · PI KATZE, MICHAEL G · 1986 to 2009
$3.4M
HEPATITIS C VIRUS AND INTERFERON--CONTROL OF PKR BY NS5AR01AI041629 · NIAID · UNIVERSITY OF WASHINGTON · PI KATZE, MICHAEL G · 1997 to 2001
$465k
NCRR NIH HHS P51 RR000166NCRR NIH HHS RR-00166NIAID NIH HHS AI-22646NIAID NIH HHS AI-41629NIAID NIH HHS R01 AI022646
6 · The paper itself

Abstract

Influenza virus, the causative agent of the common flu, is a worldwide health problem with significant economic consequences. Studies of influenza virus biology have revealed elaborate mechanisms by which the virus interacts with its host cell as it inhibits the synthesis of cellular proteins, evades the innate antiviral response, and facilitates production of viral RNAs and proteins. With the advent of DNA array technology it is now possible to obtain a large-scale view of how viruses alter the environment within the host cell. In this study, the cellular response to influenza virus infection was examined by monitoring the steady-state mRNA levels for over 4,600 cellular genes. Infections with active and inactivated influenza viruses identified changes in cellular gene expression that were dependent on or independent of viral replication, respectively. Viral replication resulted in the downregulation of many cellular mRNAs, and the effect was enhanced with time postinfection. Interestingly, several genes involved in protein synthesis, transcriptional regulation, and cytokine signaling were induced by influenza virus replication, suggesting that some may play essential or accessory roles in the viral life cycle or the host cell's stress response. The gene expression pattern induced by inactivated viruses revealed induction of the cellular metallothionein genes that may represent a protective response to virus-induced oxidative stress. Genome-scale analyses of virus infections will help us to understand the complexities of virus-host interactions and may lead to the discovery of novel drug targets or antiviral therapies.

Indexed as

Gene Expression ProfilingVirus ReplicationHeLa CellsHumansOligonucleotide Array Sequence AnalysisOrthomyxoviridaeUltraviolet Rays

Identifiers

PMID11287581
PMCPMC114177
OpenAlexW2142373650

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.