Evidence map›Paper›PMID 11285229›Full record

ArticleThe EMBO journal2001

A novel mechanism of PKA anchoring revealed by solution structures of anchoring complexes.

M G Newlon, M Roy, D Morikis, D W Carr, R Westphal, J D Scott, P A Jennings

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 80 papers.

0numbers the graph read from it
0cells of the map it votes in
80citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

80 citing papers in PubMed, 201 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Review
  9. Biochemical Analysis of AKAP-Anchored PKA Signaling Complexes.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Review
  15. Review
  16. High-resolution protein-protein interaction mapping using all-The Journal of biological chemistry · 2019
    Article
  17. Review
  18. Single nucleotide polymorphisms alter kinase anchoring and the subcellular targeting of A-kinase anchoring proteins.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  19. Review
  20. Article

20 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

M G NewlonThe Department of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA 92093-0359, USA.
M Roy
D Morikis
D W Carr
R Westphal
J D Scott
P A Jennings
University of California, San Diego · US

Funding

Contemporary Approaches to Cancer Cell Signaling and CommunicationT32CA009523 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DONOGHUE, DANIEL J, YANG, JING · 1985 to 2025
$12.1M
TRANSCRIPTIONAL REGULATION BY THE CAM CASCADEP01DK044239 · NIDDK · OREGON HEALTH & SCIENCE UNIVERSITY · PI GOODMAN, RICHARD H. · 1992 to 2006
$9.6M
PROTEIN KINASE A ANCHORING IN SPERMATOZOAN FUNCTIONR01HD036408 · NICHD · OREGON HEALTH & SCIENCE UNIVERSITY · PI CARR, DANIEL W · 1998 to 2010
$1.5M
NCI NIH HHS CA09523NCI NIH HHS T32 CA009523NICHD NIH HHS R01 HD036408NIDDK NIH HHS DK44239NIDDK NIH HHS DK5444NIDDK NIH HHS P01 DK044239
6 · The paper itself

Abstract

The specificity of intracellular signaling events is controlled, in part, by compartmentalization of protein kinases and phosphatases. The subcellular localization of these enzymes is often maintained by protein- protein interactions. A prototypic example is the compartmentalization of the cAMP-dependent protein kinase (PKA) through its association with A-kinase anchoring proteins (AKAPs). A docking and dimerization domain (D/D) located within the first 45 residues of each regulatory (R) subunit protomer forms a high affinity binding site for its anchoring partner. We now report the structures of two D/D-AKAP peptide complexes obtained by solution NMR methods, one with Ht31(493-515) and the other with AKAP79(392-413). We present the first direct structural data demonstrating the helical nature of the peptides. The structures reveal conserved hydrophobic interaction surfaces on the helical AKAP peptides and the PKA R subunit, which are responsible for mediating the high affinity association in the complexes. In a departure from the dimer-dimer interactions seen in other X-type four-helix bundle dimeric proteins, our structures reveal a novel hydrophobic groove that accommodates one AKAP per RIIalpha D/D.

Indexed as

Amino Acid SequenceCarrier ProteinsCyclic AMP-Dependent Protein Kinase RIIalpha SubunitCyclic AMP-Dependent Protein KinasesIntercellular Signaling Peptides and ProteinsModels, MolecularMolecular Sequence DataPeptidesProtein Structure, SecondarySolutionsCarrier ProteinsCyclic AMP-Dependent Protein Kinase RIIalpha SubunitCyclic AMP-Dependent Protein KinasesIntercellular Signaling Peptides and ProteinsPeptidesS Ht31Solutions

Identifiers

PMID11285229
PMCPMC145475
OpenAlexW2172231976

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.