Evidence map›Paper›PMID 11283344›Full record

ArticleThe Plant cell2001

Changes in root cap pH are required for the gravity response of the Arabidopsis root.

J M Fasano, S J Swanson, E B Blancaflor, P E Dowd, T H Kao, S Gilroy

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 90 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
90citing papers in PubMed, 1 pooled it
18.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

90 citing papers in PubMed, 1 synthesis or guideline pooled it, 253 citations in OpenAlex.

  1. Root hair growth from the pH point of view.Frontiers in plant science · 2022
    Pooled it
  2. Article
  3. Review
  4. Article
  5. Low-Speed Clinorotation ofInternational journal of molecular sciences · 2023
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. Review
  13. Review
  14. Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  15. Review
  16. Article
  17. Gravity Signaling in Flowering Plant Roots.Plants (Basel, Switzerland) · 2020
    Review
  18. Article
  19. Article
  20. Review

30 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

J M FasanoBiology Department, The Pennsylvania State University, 208 Mueller Lab, University Park, Pennsylvania 16802. USA.
S J Swanson
E B Blancaflor
P E Dowd
T H Kao
S Gilroy
Pennsylvania State University · US

Funding

RNASE BASED SELF/NONSELF DISCRIMINATION MECHANISMF31GM019381 · NIGMS · PENNSYLVANIA STATE UNIVERSITY-UNIV PARK · PI DOWD, PETER E. · 1998 to 2003
$88k
NIGMS NIH HHS F31 GM019381NIGMS NIH HHS GM 19381
6 · The paper itself

Abstract

Although the columella cells of the root cap have been identified as the site of gravity perception, the cellular events that mediate gravity signaling remain poorly understood. To determine if cytoplasmic and/or wall pH mediates the initial stages of root gravitropism, we combined a novel cell wall pH sensor (a cellulose binding domain peptide-Oregon green conjugate) and a cytoplasmic pH sensor (plants expressing pH-sensitive green fluorescent protein) to monitor pH dynamics throughout the graviresponding Arabidopsis root. The root cap apoplast acidified from pH 5.5 to 4.5 within 2 min of gravistimulation. Concomitantly, cytoplasmic pH increased in columella cells from 7.2 to 7.6 but was unchanged elsewhere in the root. These changes in cap pH preceded detectable tropic growth or growth-related pH changes in the elongation zone cell wall by 10 min. Altering the gravity-related columella cytoplasmic pH shift with caged protons delayed the gravitropic response. Together, these results suggest that alterations in root cap pH likely are involved in the initial events that mediate root gravity perception or signal transduction.

Indexed as

Gravity SensingArabidopsisCell WallDextransFluoresceinsFluorescent DyesGravitropismHydrogen-Ion ConcentrationMeristemMicroscopy, ConfocalPlant Roots2',7'-bis(carboxyethyl)-5(6)-carboxyfluoresceinDextransFluoresceinsFluorescent DyesNASA Discipline Plant BiologyNon-NASA Center

Identifiers

PMID11283344
PMCPMC135544
OpenAlexW2122228351

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.