Evidence map›Paper›PMID 11283250›Full record

ArticleMolecular and cellular biology2001

UvsW protein regulates bacteriophage T4 origin-dependent replication by unwinding R-loops.

K C Dudas, K N Kreuzer

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 53 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Ribonucleotides in bacterial DNA.Critical reviews in biochemistry and molecular biology · 2015
    Review
  13. Article
  14. Article
  15. Rho-dependent transcription termination is essential to prevent excessive genome-wide R-loops in Escherichia coli.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  16. Article
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

K C DudasDepartment of Microbiology, Duke University Medical Center, Durham, North Carolina 27710, USA.
K N Kreuzer
Duke University · USDuke University Hospital · US

Funding

INITIATION OF DNA REPLICATION IN THE PHAGE T4 SYSTEMR37GM034622 · NIGMS · DUKE UNIVERSITY · PI KREUZER, KENNETH N · 2001 to 2005
$1.5M
INITIATION OF DNA REPLICATION IN THE PHAGE T4 SYSTEMR01GM034622 · NIGMS · DUKE UNIVERSITY · PI KREUZER, KENNETH N · 1985 to 2000
$252k
INITIATION OF T4 REPLICATION--STUDY OF AN RNA/DNA HYBRIDF32GM019000 · NIGMS · DUKE UNIVERSITY · PI DUDAS, KATHLEEN C · 1997 to 1999
–
NIGMS NIH HHS F32 GM019000NIGMS NIH HHS F32 GM19000NIGMS NIH HHS GM34622NIGMS NIH HHS R01 GM034622NIGMS NIH HHS R37 GM034622
6 · The paper itself

Abstract

The UvsW protein of bacteriophage T4 is involved in many aspects of phage DNA metabolism, including repair, recombination, and recombination-dependent replication. UvsW has also been implicated in the repression of origin-dependent replication at late times of infection, when UvsW is normally synthesized. Two well-characterized T4 origins, ori(uvsY) and ori(34), are believed to initiate replication through an R-loop mechanism. Here we provide both in vivo and in vitro evidence that UvsW is an RNA-DNA helicase that catalyzes the dissociation of RNA from origin R-loops. Two-dimensional gel analyses show that the replicative intermediates formed at ori(uvsY) persist longer in a uvsW mutant infection than in a wild-type infection. In addition, the inappropriate early expression of UvsW protein results in the loss of these replicative intermediates. Using a synthetic origin R-loop, we also demonstrate that purified UvsW functions as a helicase that efficiently dissociates RNA from R-loops. These and previous results from a number of studies provide strong evidence that UvsW is a molecular switch that allows T4 replication to progress from a mode that initiates from R-loops at origins to a mode that initiates from D-loops formed by recombination proteins.

Indexed as

Bacteriophage T4Base SequenceDNA HelicasesDNA PrimersDNA ReplicationEscherichia coliGenes, ViralMutationNucleic Acid ConformationReplication OriginRNA, ViralViral ProteinsVirus ReplicationDNA HelicasesDNA PrimersRNA, ViralUvsW protein, Bacteriophage T4Viral Proteins

Identifiers

PMID11283250
PMCPMC86901
OpenAlexW1992555511

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.