Evidence map›Paper›PMID 11278487›Full record

ArticleThe Journal of biological chemistry2001

An essential role of Glu-243 and His-239 in the phosphotransfer reaction catalyzed by pyruvate dehydrogenase kinase.

A Tuganova, M D Yoder, K M Popov

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.3field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

A TuganovaDivision of Molecular Biology, School of Biological Sciences, University of Missouri, Kansas City, Missouri 64110-2499, USA.
M D Yoder
K M Popov
University of Missouri–Kansas City · US

Funding

CHARACTERIZATION OF A NEW FAMILY OF PROTEIN KINASESR01GM051262 · NIGMS · UNIVERSITY OF MISSOURI KANSAS CITY · PI POPOV, KIRILL M · 2000 to 2012
$3.1M
REGULATION OF PYRUVATE DEHYDROGENASE PHOSPHATASER01DK056898 · NIDDK · UNIVERSITY OF MISSOURI KANSAS CITY · PI POPOV, KIRILL M · 2000 to 2003
$889k
NEW FAMILY OF PROTEIN KINASESR29GM051262 · NIGMS · UNIVERSITY OF MISSOURI KANSAS CITY · PI POPOV, KIRILL M · 1995 to 1999
–
NIDDK NIH HHS DK 56898NIDDK NIH HHS R01 DK056898NIGMS NIH HHS GM 51262NIGMS NIH HHS R01 GM051262NIGMS NIH HHS R29 GM051262
6 · The paper itself

Abstract

This study was undertaken to examine the mechanistic significance of two highly conserved residues positioned in the active site of pyruvate dehydrogenase kinase, Glu-243 and His-239. We used site-directed mutagenesis to convert Glu-243 to Ala, Asp, or Gln and His-239 to Ala. The resulting mutant kinases demonstrated a greatly reduced capacity for phosphorylation of pyruvate dehydrogenase. The Glu-243 to Asp mutant had approximately 2% residual activity, whereas the Glu-243 to Ala or Gln mutants exhibited less than 0.5 and 0.1% residual activity, respectively. Activity of the His-239 to Ala mutant was decreased by approximately 90%. Active-site titration with [alpha-(32)P]ATP revealed that neither Glu-243 nor His-239 mutations affected nucleotide binding. All mutant kinases showed similar or even somewhat greater affinity than the wild-type kinase toward the protein substrate, pyruvate dehydrogenase complex. Furthermore, neither of the mutations affected the inter-subunit interactions. Finally, pyruvate dehydrogenase kinase was found to possess a weak ATP hydrolytic activity, which required Glu-243 and His-239 similar to the kinase activity. Based on these observations, we propose a mechanism according to which the invariant glutamate residue (Glu-243) acts as a general base catalyst, which activates the hydroxyl group on a serine residue of the protein substrate for direct attack on the gamma phosphate. The glutamate residue in turn might be further polarized through interaction with the neighboring histidine residue (His-239).

Indexed as

CatalysisEnzyme ActivationEscherichia coliGlutamineHistidineHumansMutagenesis, Site-DirectedPoint MutationProtein KinasesProtein Serine-Threonine KinasesPyruvate Dehydrogenase Acetyl-Transferring KinaseRecombinant ProteinsStructure-Activity RelationshipGlutamineHistidineProtein KinasesProtein Serine-Threonine KinasesPyruvate Dehydrogenase Acetyl-Transferring KinaseRecombinant Proteins

Identifiers

PMID11278487
PMCPMC2144735
OpenAlexW1991299293

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.