ReviewGenome biology2001
Watching the hands of the Arabidopsis biological clock.
Review in Genome biology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
12 citing papers in PubMed.
- A Novel Signaling Pathway Required for Arabidopsis Endodermal Root Organization Shapes the Rhizosphere Microbiome.Plant & cell physiology · 2021Article
- Heat the Clock: Entrainment and Compensation inJournal of circadian rhythms · 2019Article
- Dynamical differential expression (DyDE) reveals the period control mechanisms of the Arabidopsis circadian oscillator.PLoS computational biology · 2019Article
- Mathematical modeling of an oscillating gene circuit to unravel the circadian clock network of Arabidopsis thaliana.Frontiers in plant science · 2013Article
- TIME FOR COFFEE represses accumulation of the MYC2 transcription factor to provide time-of-day regulation of jasmonate signaling in Arabidopsis.The Plant cell · 2012Article
- EARLY FLOWERING4 recruitment of EARLY FLOWERING3 in the nucleus sustains the Arabidopsis circadian clock.The Plant cell · 2012Article
- A reduced-function allele reveals that EARLY FLOWERING3 repressive action on the circadian clock is modulated by phytochrome signals in Arabidopsis.The Plant cell · 2011Article
- Significance of light, sugar, and amino acid supply for diurnal gene regulation in developing barley caryopses.Plant physiology · 2010Article
- The 5'UTR of CCA1 includes an autoregulatory cis element that segregates between light and circadian regulation of CCA1 and LHY.Plant molecular biology · 2010Article
- Defining global neuroendocrine gene expression patterns associated with reproductive seasonality in fish.PloS one · 2009Article
- A systematic survey in Arabidopsis thaliana of transcription factors that modulate circadian parameters.BMC genomics · 2008Article
- Structural insights into the function of the core-circadian factor TIMING OF CAB2 EXPRESSION 1 (TOC1).Journal of circadian rhythms · 2008Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
2 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Oligonucleotide and cDNA microarrays have been used to analyse the mRNA levels of 8,000 genes in Arabidopsis thaliana throughout the day/night cycle. Genes involved in signal transduction and in various metabolic pathways were found to be coordinately regulated by circadian rhythms and/or by light.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.