Evidence map›Paper›PMID 11266561›Full record

ArticleNucleic acids research2001

Mitochondrial DNA ligase function in Saccharomyces cerevisiae.

S L Donahue, B E Corner, L Bordone, C Campbell

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Manipulating and elucidating mitochondrial gene expression with engineered proteins.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. ATP-dependent DNA ligases.Genome biology · 2002
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

S L DonahueDepartment of Pharmacology, University of Minnesota Medical School, 6-120 Jackson Hall, 321 Church Street SE, Minneapolis, MN 55455, USA.
B E Corner
L Bordone
C Campbell
University of Minnesota Medical Center · US

Funding

MAMMALIAN MITOCHONDRIAL DNA DOUBLE-STRAND-BREAK-REPAIRR01AG016678 · NIA · UNIVERSITY OF MINNESOTA TWIN CITIES · PI CAMPBELL, COLIN R · 2000 to 2003
$728k
RAD52 FUNCTION IN MAMMALIAN SOMATIC CELLSR29CA061906 · NCI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI CAMPBELL, COLIN R · 1997 to 2001
$205k
NCI NIH HHS CA61906NIA NIH HHS AG16678NIA NIH HHS R01 AG016678
6 · The paper itself

Abstract

The Saccharomyces cerevisiae CDC9 gene encodes a DNA ligase protein that is targeted to both the nucleus and the mitochondria. While nuclear Cdc9p is known to play an essential role in nuclear DNA replication and repair, its role in mitochondrial DNA dynamics has not been defined. It is also unclear whether additional DNA ligase proteins are present in yeast mitochondria. To address these issues, mitochondrial DNA ligase function in S.cerevisiae was analyzed. Biochemical analysis of mitochondrial protein extracts supported the conclusion that Cdc9p was the sole DNA ligase protein present in this organelle. Inactivation of mitochondrial Cdc9p function led to a rapid decline in cellular mitochondrial DNA content in both dividing and stationary yeast cultures. In contrast, there was no apparent defect in mitochondrial DNA dynamics in a yeast strain deficient in Dnl4p (Deltadnl4). The Escherichia coli ECO:RI endonuclease was targeted to yeast mitochondria. Transient expression of this recombinant ECO:RI endonuclease led to the formation of mitochondrial DNA double-strand breaks. While wild-type and Deltadnl4 yeast were able to rapidly recover from this mitochondrial DNA damage, clones deficient in mitochondrial Cdc9p were not. These results support the conclusion that yeast rely upon a single DNA ligase, Cdc9p, to carry out mitochondrial DNA replication and recovery from both spontaneous and induced mitochondrial DNA damage.

Indexed as

Cell DivisionDeoxyribonuclease EcoRIDNA DamageDNA Ligase ATPDNA LigasesGreen Fluorescent ProteinsLuminescent ProteinsMicroscopy, ConfocalMitochondriaMutationOligonucleotidesRecombinant Fusion ProteinsSaccharomyces cerevisiaeTemperatureCDC9 protein, S cerevisiaeDeoxyribonuclease EcoRIDNA Ligase ATPDNA LigasesGreen Fluorescent ProteinsLuminescent ProteinsOligonucleotidesRecombinant Fusion Proteins

Identifiers

PMID11266561
PMCPMC31271
OpenAlexW2006408943

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.