Evidence map›Paper›PMID 11256605›Full record

ArticleEMBO reports2000

DNA motif associated with meiotic double-strand break regions in Saccharomyces cerevisiae.

A Blumental-Perry, D Zenvirth, S Klein, I Onn, G Simchen

Open access · bronzeAbstract read
In one paragraph

Article in EMBO reports, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 22 citations in OpenAlex.

  1. The consequences of sequence erosion in the evolution of recombination hotspots.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017
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  10. Meiotic recombination frequencies are affected by nutritional states in Saccharomycescerevisiae.Proceedings of the National Academy of Sciences of the United States of America · 2001
    Article
  11. Global mapping of meiotic recombination hotspots and coldspots in the yeast Saccharomyces cerevisiae.Proceedings of the National Academy of Sciences of the United States of America · 2000
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

A Blumental-PerryDepartment of Genetics, The Hebrew University, Jerusalem, Israel.
D Zenvirth
S Klein
I Onn
G Simchen
Hebrew University of Jerusalem · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Meiotic recombination in yeast is initiated by DNA double-strand breaks (DSBs) that occur at preferred sites, distributed along the chromosomes. These DSB sites undergo changes in chromatin structure early in meiosis, but their common features at the level of DNA sequence have not been defined until now. Alignment of 1 kb sequences flanking six well-mapped DSBs has allowed us to define a flexible sequence motif, the CoHR profile, which predicts the great majority of meiotic DSB locations. The 50 bp profile contains a poly(A) tract in its centre and may have several gaps of unrelated sequences over a total length of up to 250 bp. The major exceptions to the correlation between CoHRs and preferred DSB sites are at telomeric regions, where DSBs do not occur. The CoHR sequence may provide the basis for understanding meiosis-induced chromatin changes that enable DSBs to occur at defined chromosomal sites.

Indexed as

Saccharomyces cerevisiae ProteinsArgininosuccinate LyaseBase SequenceChromatinChromosome BreakageChromosomes, FungalDNA, FungalFungal ProteinsGenes, FungalMeiosisNucleic Acid ConformationPromoter Regions, GeneticRecombination, GeneticSaccharomyces cerevisiaeSequence AlignmentSequence Homology, Nucleic AcidArg4 protein, S cerevisiaeArgininosuccinate LyaseChromatinDNA, FungalFungal ProteinsSaccharomyces cerevisiae Proteins

Identifiers

PMID11256605
PMCPMC1083721
OpenAlexW2117775046

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.