Evidence map›Paper›PMID 11251097›Full record

ArticleThe Plant cell2001

HC-Pro suppression of transgene silencing eliminates the small RNAs but not transgene methylation or the mobile signal.

A C Mallory, L Ely, T H Smith, R Marathe, R Anandalakshmi, M Fagard, H Vaucheret, G Pruss, L Bowman, V B Vance

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 91 papers.

0numbers the graph read from it
0cells of the map it votes in
91citing papers in PubMed
55.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

91 citing papers in PubMed, 302 citations in OpenAlex.

  1. Article
  2. Truncated CMV2bPlant methods · 2025
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  7. Mini review: Revisiting mobile RNA silencing in plants.Plant science : an international journal of experimental plant biology · 2019
    Review
  8. Article
  9. Article
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  15. Article
  16. Virus infection triggers widespread silencing of host genes by a distinct class of endogenous siRNAs in Arabidopsis.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  17. Article
  18. Article
  19. Article
  20. Article

31 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

A C MalloryDepartment of Biological Sciences, University of South Carolina, Columbia, South Carolina 29208, USA.
L Ely
T H Smith
R Marathe
R Anandalakshmi
M Fagard
H Vaucheret
G Pruss
L Bowman
V B Vance
University of South Carolina · USLaboratoire de Génétique Cellulaire · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Post-transcriptional gene silencing (PTGS) is a sequence-specific RNA degradation mechanism that is widespread in eukaryotic organisms. It is often associated with methylation of the transcribed region of the silenced gene and with accumulation of small RNAs (21 to 25 nucleotides) homologous to the silenced gene. In plants, PTGS can be triggered locally and then spread throughout the organism via a mobile signal that can cross a graft junction. Previously, we showed that the helper component-proteinase (HC-Pro) of plant potyviruses suppresses PTGS. Here, we report that plants in which PTGS has been suppressed by HC-Pro fail to accumulate the small RNAs associated with silencing. However, the transgene locus of these plants remains methylated. Grafting experiments indicate that HC-Pro prevents the plant from responding to the mobile silencing signal but does not eliminate its ability to produce or send the signal. These results demonstrate that HC-Pro functions downstream of transgene methylation and the mobile signal at a step preceding accumulation of the small RNAs.

Indexed as

Suppression, GeneticAlgorithmsBlotting, NorthernBlotting, SouthernCysteine EndopeptidasesGene SilencingGlucuronidaseIn Vitro TechniquesMethylationNicotianaPlants, Genetically ModifiedPlants, ToxicPlant VirusesPolymerase Chain ReactionRNA, PlantRNA Processing, Post-TranscriptionalCysteine EndopeptidasesGlucuronidaseHC-Pro protein, potyvirusRNA, PlantViral Proteins

Identifiers

PMID11251097
PMCPMC135514
OpenAlexW2114165797

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.