Evidence map›Paper›PMID 11251096›Full record

ArticleThe Plant cell2001

Expression and post-transcriptional regulation of maize transposable element MuDR and its derivatives.

G N Rudenko, V Walbot

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
5.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 55 citations in OpenAlex.

  1. Independent evolution of transposase and TIRs facilitated by recombination betweenProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  2. Sulfuric Acid and Gibberellic Acid (GAThe protein journal · 2021
    Article
  3. Article
  4. Silencing ofGenetics · 2020
    Article
  5. Article
  6. Evolution ofMobile DNA · 2019
    Article
  7. Article
  8. Article
  9. Diversity and evolution of transposable elements in Arabidopsis.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2014
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Comparative analysis of Mutator -like transposases in sugarcane.Molecular genetics and genomics : MGG · 2004
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

G N RudenkoDepartment of Biological Sciences, 385 Serra Mall, Stanford University, Stanford, California 94305-5020, USA. rudenko@leland.stanford.edu
V Walbot
Stanford University · US

Funding

MUTATOR TRANSPORTABLE ELEMENTS OF MAIZER01GM049681 · NIGMS · STANFORD UNIVERSITY · PI WALBOT, VIRGINIA E · 1993 to 2005
$1.8M
NIGMS NIH HHS GM 49681NIGMS NIH HHS R01 GM049681
6 · The paper itself

Abstract

The transposition of Mu elements underlying Mutator activity in maize requires a transcriptionally active MuDR element. Despite variation in MuDR copy number and RNA levels in Mutator lines, transposition events are consistently late in plant development, and Mu excision frequencies are similar. Here, we report previously unsuspected and ubiquitous MuDR homologs that produce both RNA and protein. MuDR transcript levels are proportional to MuDR copy number, and homolog transcript levels increase in active Mutator lines. A subset of homologs exhibits constitutive transcription in MuDR(-) and epigenetically silenced MuDR lines, suggesting independent transcriptional regulation. Surprisingly, immunodetection demonstrated nearly invariant levels of MuDR and homolog protein products in all tested Mutator and non-Mutator stocks. These results suggest a strict control over protein production, which might explain the uniform excision frequency of Mu elements. Moreover, the nonfunctional proteins encoded by homologs may negatively regulate Mutator activity and represent part of the host defense against this transposon family.

Indexed as

DNA Transposable ElementsGene Expression Regulation, PlantGenes, PlantSequence Homology, Nucleic AcidBase SequenceDNA ReplicationGenes, RegulatorMutationPhylogenyPlant ProteinsPollenRNA, PlantRNA Processing, Post-TranscriptionalSequence Homology, Amino AcidTranscription, GeneticZea maysDNA Transposable ElementsPlant ProteinsRNA, Plant

Identifiers

PMID11251096
PMCPMC135511
OpenAlexW2169191463

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.