Evidence map›Paper›PMID 11248055›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2001

Circularly permuted green fluorescent proteins engineered to sense Ca2+.

T Nagai, A Sawano, E S Park, A Miyawaki

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 393 papers.

0numbers the graph read from it
0cells of the map it votes in
393citing papers in PubMed
38.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

393 citing papers in PubMed, 966 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Redesign of Calmodulin for Genetically Encoded ZnChemical & biomedical imaging · 2026
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  5. Energetic gradients emerge in developing motor-microtubule structures.bioRxiv : the preprint server for biology · 2026
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  6. Allosteric Biosensors Unravel GTPase-Effector Feedback.bioRxiv : the preprint server for biology · 2026
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  7. Article
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  9. Review
  10. Article
  11. Review
  12. Article
  13. Review
  14. Resting CaCellular and molecular life sciences : CMLS · 2025
    Article
  15. Review
  16. Review
  17. Article
  18. Genetically encoded sensors illuminateIBRO neuroscience reports · 2025
    Article
  19. Split genetically encoded calcium indicators for interorganellar junctions.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  20. Review

333 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

T NagaiLaboratory for Cell Function and Dynamics, Advanced Technology Development Center, Brain Science Institute, Institute of Physical and Chemical Research (RIKEN), 2-1 Hirosawa, Wako, Saitama, 351-0198, Japan.
A Sawano
E S Park
A Miyawaki
RIKEN · JPRIKEN Center for Brain Science · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To visualize Ca(2+)-dependent protein-protein interactions in living cells by fluorescence readouts, we used a circularly permuted green fluorescent protein (cpGFP), in which the amino and carboxyl portions had been interchanged and reconnected by a short spacer between the original termini. The cpGFP was fused to calmodulin and its target peptide, M13. The chimeric protein, which we have named "pericam," was fluorescent and its spectral properties changed reversibly with the amount of Ca(2+), probably because of the interaction between calmodulin and M13 leading to an alteration of the environment surrounding the chromophore. Three types of pericam were obtained by mutating several amino acids adjacent to the chromophore. Of these, "flash-pericam" became brighter with Ca(2+), whereas "inverse-pericam" dimmed. On the other hand, "ratiometric-pericam" had an excitation wavelength changing in a Ca(2+)-dependent manner. All of the pericams expressed in HeLa cells were able to monitor free Ca(2+) dynamics, such as Ca(2+) oscillations in the cytosol and the nucleus. Ca(2+) imaging using high-speed confocal line-scanning microscopy and a flash-pericam allowed to detect the free propagation of Ca(2+) ions across the nuclear envelope. Then, free Ca(2+) concentrations in the nucleus and mitochondria were simultaneously measured by using ratiometric-pericams having appropriate localization signals, revealing that extra-mitochondrial Ca(2+) transients caused rapid changes in the concentration of mitochondrial Ca(2+). Finally, a "split-pericam" was made by deleting the linker in the flash-pericam. The Ca(2+)-dependent interaction between calmodulin and M13 in HeLa cells was monitored by the association of the two halves of GFP, neither of which was fluorescent by itself.

Indexed as

CalciumCalmodulinCations, DivalentDimerizationGene ExpressionGenes, ReporterGenetic EngineeringGenetic VariationGreen Fluorescent ProteinsHeLa CellsHumansLuminescent ProteinsMyosin-Light-Chain KinaseNuclear EnvelopePeptide FragmentsPermeabilityCalciumCalmodulinCations, DivalentGreen Fluorescent ProteinsLuminescent ProteinsM13 protein (myosin light-chain kinase)Myosin-Light-Chain KinasePeptide FragmentsRecombinant Fusion Proteins

Identifiers

PMID11248055
PMCPMC30630
OpenAlexW2013151879

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.