Evidence map›Paper›PMID 11244108›Full record

ArticlePlant physiology2001

Quantitative trait locus mapping of loci influencing elongation factor 1alpha content in maize endosperm.

X Wang, Y M Woo, C S Kim, B A Larkins

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
6.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Identification of the quantitative trait loci (QTL) underlying water soluble protein content in soybean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2013
    Article
  3. Gamma-zeins are essential for endosperm modification in quality protein maize.Proceedings of the National Academy of Sciences of the United States of America · 2010
    Article
  4. Quantitative trait loci controlling sulfur containing amino acids, methionine and cysteine, in soybean seeds.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2006
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. An improved genetic model generates high-resolution mapping of QTL for protein quality in maize endosperm.Proceedings of the National Academy of Sciences of the United States of America · 2002
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

X WangDepartment of Plant Sciences, University of Arizona, Tucson, AZ 85721, USA.
Y M Woo
C S Kim
B A Larkins
University of Arizona · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The nutritional value of maize (Zea mays) seed is most limited by its protein quality because its storage proteins are devoid of the essential amino acid lysine (Lys). The Lys content of the kernel can be significantly increased by the opaque-2 mutation, which reduces zein synthesis and increases accumulation of proteins that contain Lys. Elongation factor 1alpha (eEF1A) is one of these proteins, and its concentration is highly correlated with the Lys content of the endosperm. We investigated the genetic regulation of eEF1A and the basis for its relationship with other Lys-containing proteins by analyzing the progeny of a cross between a high (Oh51Ao2) and a low (Oh545o2) eEF1A maize inbred. We identified 83 simple sequence repeat loci that are polymorphic between these inbreds; the markers are broadly distributed over the genome (1,402 cM) with an average interval of 17 cM. Genotypic analysis of the F(2) progeny revealed two significant quantitative trait loci that account for 25% of the variance for eEF1A content. One of these is on the short arm of chromosome 4 and is linked with a cluster of 22-kD alpha-zein coding sequences; the other quantitative trait locus is on the long arm of chromosome 7. The content of alpha-zein and gamma-zein was measured in pools of high- and low-eEF1A individuals obtained from this cross, and a higher level of alpha-zein was found to cosegregate with high eEF1A content. Allelic variation at the 22-kD alpha-zein locus may contribute to the difference of eEF1A content between Oh51Ao2 and Oh545o2 by increasing the surface area of protein bodies in the endosperm and creating a more extensive network of cytoskeletal proteins.

Indexed as

Quantitative Trait, HeritableChromosome MappingCrosses, GeneticDNA, PlantMicroscopy, ElectronPeptide Elongation Factor 1PhenotypeZea maysDNA, PlantPeptide Elongation Factor 1

Identifiers

PMID11244108
PMCPMC65607
OpenAlexW1970449449

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.