Evidence map›Paper›PMID 11238947›Full record

ArticleMolecular and cellular biology2001

RNA trafficking signals in human immunodeficiency virus type 1.

A J Mouland, H Xu, H Cui, W Krueger, T P Munro, M Prasol, J Mercier, D Rekosh, R Smith, E Barbarese and 2 more

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 79 citations in OpenAlex.

  1. Review
  2. Review
  3. Let It Go: HIV-1Journal of virology · 2021
    Review
  4. Review
  5. Article
  6. Review
  7. Article
  8. Review
  9. Emerging Roles of NFrontiers in microbiology · 2018
    Review
  10. Subcellular Localization of HIV-1Journal of virology · 2017
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Neuronal mRNAs travel singly into dendrites.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 3 countries.

A J MoulandLaboratory of Human Retrovirology, Department of Microbiology and Immunology, University of Montreal, Montreal, Quebec, Canada.
H Xu
H Cui
W Krueger
T P Munro
M Prasol
J Mercier
D Rekosh
R Smith
E Barbarese
E A Cohen
J H Carson
UConn Health · USUniversité de Montréal · CAUniversity of Queensland · AUUniversity of Virginia · US

Funding

OLIGODENDROCYTE ONTOGENY AND DIFFERENTIATIONR01NS019943 · NINDS · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI BARBARESE, ELISA M · 1985 to 2011
$3.1M
RNA Trafficking in Neural Cells.R01NS015190 · NINDS · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI CARSON, JOHN H · 1985 to 2009
$2.4M
HIV PARTICLE FORMATION AND RNA PACKAGINGR01AI047008 · NIAID · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI REKOSH, DAVID M · 2000 to 2003
$1.0M
RNA trafficking in neural cellsR56NS015190 · NINDS · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI CARSON, JOHN H · 2007 to 2007
$364k
NIAID NIH HHS AI47008NIAID NIH HHS R01 AI047008NINDS NIH HHS NS19943NINDS NIH HHS R01 NS015190NINDS NIH HHS R01 NS019943NINDS NIH HHS R56 NS015190
6 · The paper itself

Abstract

Intracellular trafficking of retroviral RNAs is a potential mechanism to target viral gene expression to specific regions of infected cells. Here we show that the human immunodeficiency virus type 1 (HIV-1) genome contains two sequences similar to the hnRNP A2 response element (A2RE), a cis-acting RNA trafficking sequence that binds to the trans-acting trafficking factor, hnRNP A2, and mediates a specific RNA trafficking pathway characterized extensively in oligodendrocytes. The two HIV-1 sequences, designated A2RE-1, within the major homology region of the gag gene, and A2RE-2, in a region of overlap between the vpr and tat genes, both bind to hnRNP A2 in vitro and are necessary and sufficient for RNA transport in oligodendrocytes in vivo. A single base change (A8G) in either sequence reduces hnRNP A2 binding and, in the case of A2RE-2, inhibits RNA transport. A2RE-mediated RNA transport is microtubule and hnRNP A2 dependent. Differentially labelled gag and vpr RNAs, containing A2RE-1 and A2RE-2, respectively, coassemble into the same RNA trafficking granules and are cotransported to the periphery of the cell. tat RNA, although it contains A2RE-2, is not transported as efficiently as vpr RNA. An A2RE/hnRNP A2-mediated trafficking pathway for HIV RNA is proposed, and the role of RNA trafficking in targeting HIV gene expression is discussed.

Indexed as

Heterogeneous-Nuclear Ribonucleoprotein Group A-BAnimalsBase SequenceBiological TransportCells, CulturedGene Products, gagGene Products, vprHeterogeneous-Nuclear RibonucleoproteinsHIV-1MiceMolecular BiologyMolecular Sequence DataOligodendrogliaPeptide FragmentsResponse ElementsRibonucleoproteinsGene Products, gagGene Products, vprHeterogeneous-Nuclear Ribonucleoprotein Group A-BHeterogeneous-Nuclear RibonucleoproteinshnRNP A2Peptide FragmentsRibonucleoproteinsRNA, Viralvpr Gene Products, Human Immunodeficiency Virusvpr peptide (13-33), Human immunodeficiency virus 1

Identifiers

PMID11238947
PMCPMC86835
OpenAlexW2141666039

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.