Evidence map›Paper›PMID 11238935›Full record

ArticleMolecular and cellular biology2001

Dosage suppressors of pds1 implicate ubiquitin-associated domains in checkpoint control.

D J Clarke, G Mondesert, M Segal, B L Bertolaet, S Jensen, M Wolff, M Henze, S I Reed

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 87 citations in OpenAlex.

  1. Review
  2. Review
  3. Proteasome condensate formation is driven by multivalent interactions with shuttle factors and ubiquitin chains.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Review
  5. Article
  6. Article
  7. Ddi1 is a ubiquitin-dependent protease.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  8. DNA-Histone Cross-Links: Formation and Repair.Frontiers in cell and developmental biology · 2020
    Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Decoding ubiquitin for mitosis.Genes & cancer · 2012
    Article
  17. Article
  18. Article
  19. p62 serves as a shuttling factor for TrkA interaction with the proteasome.Biochemical and biophysical research communications · 2008
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

D J ClarkeDepartment of Molecular Biology, The Scripps Research Institute, La Jolla, California 92037, USA.
G Mondesert
M Segal
B L Bertolaet
S Jensen
M Wolff
M Henze
S I Reed
Scripps Research Institute · US

Funding

CONTROL OF CELL DIVISION IN YEASTR37GM038328 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI REED, STEVEN I · 2000 to 2009
$4.3M
STUDIES ON THE CONTROL OF CELL DIVISION IN YEASTR01GM038328 · NIGMS · SCRIPPS RESEARCH INSTITUTE · PI REED, STEVEN I · 1987 to 1999
–
NIGMS NIH HHS GM38328NIGMS NIH HHS R01 GM038328NIGMS NIH HHS R37 GM038328
6 · The paper itself

Abstract

In budding yeast, anaphase initiation is controlled by ubiquitin-dependent degradation of Pds1p. Analysis of pds1 mutants implicated Pds1p in the DNA damage, spindle assembly, and S-phase checkpoints. Though some components of these pathways are known, others remain to be identified. Moreover, the essential function of Pds1p, independent of its role in checkpoint control, has not been elucidated. To identify loci that genetically interact with PDS1, we screened for dosage suppressors of a temperature-sensitive pds1 allele, pds1-128, defective for checkpoint control at the permissive temperature and essential for viability at 37 degrees C. Genetic and functional interactions of two suppressors are described. RAD23 and DDI1 suppress the temperature and hydroxyurea, but not radiation or nocodazole, sensitivity of pds1-128. rad23 and ddi1 mutants are partially defective in S-phase checkpoint control but are proficient in DNA damage and spindle assembly checkpoints. Therefore, Rad23p and Ddi1p participate in a subset of Pds1p-dependent cell cycle controls. Both Rad23p and Ddi1p contain ubiquitin-associated (UBA) domains which are required for dosage suppression of pds1-128. UBA domains are found in several proteins involved in ubiquitin-dependent proteolysis, though no function has been assigned to them. Deletion of the UBA domains of Rad23p and Ddi1p renders cells defective in S-phase checkpoint control, implicating UBA domains in checkpoint signaling. Since Pds1p destruction, and thus checkpoint regulation of mitosis, depends on ubiquitin-dependent proteolysis, we propose that the UBA domains functionally interact with the ubiquitin system to control Pds1p degradation in response to checkpoint activation.

Indexed as

Cell Cycle ProteinsGene DosageProtein Serine-Threonine KinasesSaccharomyces cerevisiae ProteinsSuppression, GeneticAmino Acid SequenceCheckpoint Kinase 2Fungal ProteinsGamma RaysHydroxyureaMolecular Sequence DataMutationNocodazoleNuclear ProteinsProtein KinasesProtein Structure, TertiaryCell Cycle ProteinsCheckpoint Kinase 2DDI1 protein, S cerevisiaeFungal ProteinsHydroxyureaNocodazoleNuclear ProteinsPDS1 protein, S cerevisiaeProtein KinasesProtein Serine-Threonine KinasesRAD53 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSecurinUbiquitins

Identifiers

PMID11238935
PMCPMC86795
OpenAlexW1979105476

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.