Evidence map›Paper›PMID 11238911›Full record

ArticleMolecular and cellular biology2001

TFIIA interacts with TFIID via association with TATA-binding protein and TAF40.

S M Kraemer, R T Ranallo, R C Ogg, L A Stargell

Abstract read
In one paragraph

Article in Molecular and cellular biology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

S M KraemerDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, Colorado 80523-1870, USA.
R T Ranallo
R C Ogg
L A Stargell

Funding

GENETIC ANALYSIS OF TRANSCRIPTION INITIATIONR01GM056884 · NIGMS · COLORADO STATE UNIVERSITY-FORT COLLINS · PI STARGELL, LAURIE A · 1998 to 2007
$1.8M
NIGMS NIH HHS GM56884NIGMS NIH HHS R01 GM056884
6 · The paper itself

Abstract

TFIIA and TATA-binding protein (TBP) associate directly at the TATA element of genes transcribed by RNA polymerase II. In vivo, TBP is complexed with approximately 14 TBP-associated factors (TAFs) to form the general transcription factor TFIID. How TFIIA and TFIID communicate is not well understood. We show that in addition to making direct contacts with TBP, yeast TAF40 interacts directly and specifically with TFIIA. Mutational analyses of the Toa2 subunit of TFIIA indicate that loss of functional interaction between TFIIA and TAF40 results in conditional growth phenotypes and defects in transcription. These results demonstrate that the TFIIA-TAF40 interaction is important in vivo and indicate a functional role for TAF40 as a bridging factor between TFIIA and TFIID.

Indexed as

Saccharomyces cerevisiae ProteinsTATA-Binding Protein Associated FactorsCell SurvivalDNA-Binding ProteinsDNA Mutational AnalysisDose-Response Relationship, DrugEscherichia coliFungal ProteinsGlutathione TransferaseModels, MolecularMutagenesisMutationPhenotypeProtein BindingProtein Structure, TertiaryTATA-Box Binding ProteinDNA-Binding ProteinsFungal ProteinsGlutathione TransferaseSaccharomyces cerevisiae ProteinsTAF11 protein, S cerevisiaeTATA-Binding Protein Associated FactorsTATA-Box Binding ProteinTOA2 protein, S cerevisiaeTranscription FactorsTranscription Factors, TFIITranscription Factor TFIIATranscription Factor TFIID

Identifiers

PMID11238911
PMCPMC86722

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.