Evidence map›Paper›PMID 11238906›Full record

ArticleMolecular and cellular biology2001

Ambient pH signaling regulates nuclear localization of the Aspergillus nidulans PacC transcription factor.

J M Mingot, E A Espeso, E Díez, M A Peñalva

Abstract read
In one paragraph

Article in Molecular and cellular biology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Regulation of Secondary Metabolism in theInternational journal of molecular sciences · 2020
    Review
  5. Article
  6. Article
  7. A Highly Efficient Xylan-Utilization System inFrontiers in microbiology · 2018
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
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  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

J M MingotCentro de Investigaciones Biológicas CSIC, Madrid 28006, Spain.
E A Espeso
E Díez
M A Peñalva

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Aspergillus nidulans zinc finger transcription factor PacC is activated by proteolytic processing in response to ambient alkaline pH. The pH-regulated step is the transition of full-length PacC from a closed to an open, protease-accessible conformation. Here we show that in the absence of ambient pH signaling, the C-terminal negative-acting domain prevents the nuclear localization of full-length closed PacC. In contrast, the processed PacC form is almost exclusively nuclear at any ambient pH. In the presence of ambient pH signaling, the fraction of PacC that is in the open conformation but has not yet been processed localizes to the nucleus. Therefore, ambient alkaline pH leads to an increase in nuclear PacC by promoting the proteolytic elimination of the negative-acting domain to yield the processed form and by increasing the proportion of full-length protein that is in the open conformation. These findings explain why mutations resulting in commitment of PacC to processing irrespective of ambient pH lead to permanent PacC activation and alkalinity mimicry. A nuclear import signal that targets Escherichia coli beta-galactosidase to the nucleus has been located to the PacC zinc finger region. A mutation abolishing DNA binding does not prevent nuclear localization of the processed form, showing that PacC processing does not lead to nuclear localization by passive diffusion of the protein made possible by the reduction in size, followed by retention in the nucleus after DNA binding.

Indexed as

Fungal ProteinsAmino AcidsAspergillus nidulansBlotting, WesternCell NucleusCytoplasmCytosolDNADNA-Binding ProteinsGreen Fluorescent ProteinsHydrogen-Ion ConcentrationLuminescent ProteinsMicroscopy, FluorescenceModels, BiologicalMutagenesisMutationAmino AcidsDNADNA-Binding ProteinsFungal ProteinsGreen Fluorescent ProteinsLuminescent ProteinsPacC protein, AspergillusRecombinant Fusion ProteinsTranscription Factors

Identifiers

PMID11238906
PMCPMC86715

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.