Evidence map›Paper›PMID 11231878›Full record

ArticleBMC immunology2000

Characterization of DNA binding, transcriptional activation, and regulated nuclear association of recombinant human NFATp.

L J Kim, H A Ferguson, A G Seto, J A Goodrich

Open access · goldAbstract read
In one paragraph

Article in BMC immunology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
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  6. Human Taf(II)130 is a coactivator for NFATp.Molecular and cellular biology · 2001
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

L J KimDepartment of Chemistry and Biochemistry University of Colorado at Boulder, USA. loree.kim@u.washington.edu
H A Ferguson
A G Seto
J A Goodrich
University of Colorado Boulder · US

Funding

REGULATION OF TRANSCRIPTION AT THE HUMAN IL2 PROMOTERR01GM055235 · NIGMS · UNIVERSITY OF COLORADO AT BOULDER · PI GOODRICH, JAMES · 1998 to 2011
$2.8M
UC Santa Cruz Training Program In Genomic SciencesT32HG008345 · NHGRI · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI BROOKS, ANGELA NORIE, GREEN, RICHARD EDWARD · 2015 to 2020
$1.4M
INTEGRATION AND BIOTECHNOLOGY LEADERSHIPT32GM008345 · NIGMS · UNIVERSITY OF COLORADO AT BOULDER · PI DAVIS, ROBERT H. · 1989 to 1997
–
NHGRI NIH HHS T32 HG008345NIGMS NIH HHS GM-55235NIGMS NIH HHS R01 GM055235NIGMS NIH HHS T32 GM08345
6 · The paper itself

Abstract

backgroundNFATp is one member of a family of transcriptional activators whose nuclear accumulation and hence transcriptional activity is regulated in mammalian cells. Human NFATp exists as a phosphoprotein in the cytoplasm of naive T cells. Upon antigen stimulation, NFATp is dephosphorylated, accumulates in nuclei, and functions to regulate transcription of genes including those encoding cytokines. While the properties of the DNA binding domain of NFATp have been investigated in detail, biochemical studies of the transcriptional activation and regulated association with nuclei have remained unexplored because of a lack of full length, purified recombinant NFATp.

resultsWe developed methods for expressing and purifying full length recombinant human NFATp that has all of the properties known to be associated with native NFATp. The recombinant NFATp binds DNA on its own and cooperatively with AP-1 proteins, activates transcription in vitro, is phosphorylated, can be dephosphorylated by calcineurin, and exhibits regulated association with nuclei in vitro. Importantly, activation by recombinant NFATp in a reconstituted transcription system required regions of the protein outside of the central DNA binding domain.

conclusionsWe conclude that NFATp is a bona fide transcriptional activator. Moreover, the reagents and methods that we developed will facilitate future studies on the mechanisms of transcriptional activation and nuclear accumulation by NFATp, a member of an important family of transcriptional regulatory proteins.

Indexed as

Nuclear ProteinsAnimalsCell LineCell Line, TumorCell NucleusDNA-Binding ProteinsHeLa CellsHumansMacromolecular SubstancesMiceNFATC Transcription FactorsPeptidesPhosphorylationProtein Structure, TertiaryProto-Oncogene Proteins c-fosProto-Oncogene Proteins c-junDNA-Binding ProteinsMacromolecular SubstancesNFATC2 protein, humanNFATC Transcription FactorsNuclear ProteinsPeptidesProto-Oncogene Proteins c-fosProto-Oncogene Proteins c-junRecombinant ProteinsTranscription Factors

Identifiers

PMID11231878
PMCPMC31347
OpenAlexW2162950294

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.