Evidence map›Paper›PMID 11226570›Full record

ArticleVirus research2001

Nucleotide sequence variation of the VP7 gene of two G3-type rotaviruses isolated from dogs.

V Martella, A Pratelli, G Greco, M Gentile, P Fiorente, M Tempesta, C Buonavoglia

Abstract read
In one paragraph

Article in Virus research, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Rotavirus diarrhea in bovines and other domestic animals.Veterinary research communications · 2009
    Review
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

V MartellaDepartment of Health and Animal Well-being, Faculty of Veterinary Medicine, University of Bari, St. p Casamassima Km 3, 70010 Valenzano, Bari, Italy. v.martella@veterinaria.uniba.it
A Pratelli
G Greco
M Gentile
P Fiorente
M Tempesta
C Buonavoglia

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The sequence of the VP7 gene of two rotaviruses isolated from dogs in southern Italy was determined and the inferred amino acid sequence was compared with that of other rotavirus strains. There was very high nucleotide and amino acid identity between canine strain RV198/95 and other canine strains, and to the human strain HCR3A. Strain RV52/96, however, was found to have about 95% identity to the G3 serotype canine strains K9, A79-10 and CU-1 and 96% identity to strain RV198/95 and to the simian strain RRV. Therefore both of the canine strains belong to the G3 serotype. Nevertheless, detailed analysis of the VP7 variable regions revealed that RV52/96 possesses amino acid substitutions uncommon to the other canine isolates. In addition, strain RV52/96 exhibited a nucleotide divergence greater than 16% from all the other canine strains studied; however, it revealed the closest identity (90.4%) to the simian strain RRV. With only a few exceptions, phylogenetic analysis allowed clear differentiation of the G3 rotaviruses on the basis of the species of origin. The nucleotide and amino acid variations observed in strain RV52/96 could account for the existence of a canine rotavirus G3 sub-type.

Indexed as

Capsid ProteinsAmino Acid SequenceAnimalsAntigens, ViralCapsidCell LineDNA, ViralDog DiseasesDogsHaplorhiniHumansItalyMolecular Sequence DataPhylogenyPolymerase Chain ReactionRotavirusAntigens, ViralCapsid ProteinsDNA, ViralVP7 protein, Rotavirus

Identifiers

PMID11226570
PMCPMC7127123

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.