Evidence map›Paper›PMID 11222305›Full record

ArticleBiophysical journal2001

Halide dependence of the halorhodopsin photocycle as measured by time-resolved infrared spectra.

M S Hutson, S V Shilov, R Krebs, M S Braiman

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In one paragraph

Article in Biophysical journal, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

M S HutsonBiophysics Program, University of Virginia Health Sciences Center 456, Charlottesville, Virginia 22908, USA.
S V Shilov
R Krebs
M S Braiman
Syracuse University · USUniversity of Virginia Health System · US

Funding

TIME-RESOLVED VIBRATIONAL SPECTROSCOPY OF HALORHODOPSINR01GM046854 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI BRAIMAN, MARK S · 1992 to 1998
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TRAINING PROGRAM IN MOLECULAR BIOPHYSICST32GM008323 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI BILTONEN, RODNEY L · 1989 to 1999
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NIGMS NIH HHS GM-08323NIGMS NIH HHS GM-46854
6 · The paper itself

Abstract

Time-resolved Fourier transform infrared (FTIR) difference spectra of the halorhodopsin (hR) photocycle have been collected from 3 micros to 100 ms in saturating concentrations of KCl or KBr. Kinetic analysis of these data revealed two decay processes, with time constants of tau(1) approximately 150 micros and tau(2) approximately 16 ms in the presence of either halide, with tau(2) describing the return to the starting (hR) state. Comparison to previous low-temperature FTIR spectra of hR intermediates confirms that characteristic hK and hL spectral features are both present before the tau(1) decay, in a state previously defined as hK(L) (Dioumaev, A., and M. Braiman. 1997. Photochem. Photobiol. 66:755-763). However, the relative sizes of these features depend on which halide is present. In Br-, the hL features are clearly more dominant than in Cl-. Therefore, the state present before tau(1) is probably best described as an hK(L)/hL(1) equilibrium, instead of a single hK(L) state. Different halides affect the relative amounts of hK(L) and hL(1) present, i.e., Cl- produces a much more significant back-reaction from hL(1) to hK(L) than does Br-. The halide dependence of this back-reaction could therefore explain the halide selectivity of the halorhodopsin anion pump.

Indexed as

BacteriorhodopsinsBromidesHalobacterium salinarumHalorhodopsinsKineticsLightPotassium ChloridePotassium CompoundsRetinaldehydeSpectroscopy, Fourier Transform InfraredThermodynamicsTime FactorsBacteriorhodopsinsBromidesHalorhodopsinspotassium bromidePotassium ChloridePotassium CompoundsRetinaldehyde

Identifiers

PMID11222305
PMCPMC1301336
OpenAlexW2166203804

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.