Evidence map›Paper›PMID 11198421›Full record

ArticlePlant molecular biology2000

Amino acid deletions in loop C of the chlorophyll a-binding protein CP47 alter the chloride requirement and/or prevent the assembly of photosystem II.

S M Clarke, J J Eaton-Rye

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Article in Plant molecular biology, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

S M ClarkeDepartment of Biochemistry- University of Otago, Dunedin, New, Zealand
J J Eaton-Rye
University of Otago · NZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The chlorophyll a-binding protein CP47 directs excitation energy to the reaction center of photosystem II (PSII) during oxygenic photosynthesis and has additional structural and functional roles associated with the PSII water-oxidizing complex. Oligonucleotide-directed mutagenesis was employed to study loop C of CP47 (approximately Trp-162 to Gly-197) which faces the thylakoid lumen. Five short amino acid deletion strains, delta(S169-P171), delta(Y172-G176), delta(G176-P180), delta(E184-A188) and delta(F190-N194), were created that span this domain. The deletion between Gly-176 and Pro-180, located around the middle of loop C, produced an obligate photoheterotroph that could not assemble functional PSII centers. The deletions in mutants delta(S169-P171) and delta(Y172-G176) reduced PSII levels to < or = 20% of the control and thus impaired photoautotrophic growth. In contrast, mutants delta(E184-A188) and delta(F190-N194) were photoautotrophic even though the number of photosystems was decreased by 50%. All PSII complexes assembled in the deletion strains had an increased susceptibility to photoinactivation and deletion of Glu-184 to Ala-188 prevented photoautotrophic growth under chloride-limiting conditions. Furthermore, the removal of the extrinsic PSII-O, PSII-U and PSII-V proteins from mutants delta(E184-A188) and delta(F190-N194) reduced the rates of oxygen evolution and, in the strains lacking either the PSII-O or PSII-V proteins, also increased the photoautotrophic doubling times. These effects were greater in mutant delta(E 184-A188) than in mutant delta(F190-N194) and the order of importance for the removal of the extrinsic proteins was found to be deltaPSII-V > or = deltaPSII-O > deltaPSII-U.

Indexed as

Bacterial ProteinsLight-Harvesting Protein ComplexesPhotosystem II Protein ComplexAmino Acid SequenceChloridesCyanobacteriaCytochrome c GroupMolecular Sequence DataMutationOxygenPhotosynthetic Reaction Center Complex ProteinsSequence DeletionSequence Homology, Amino AcidBacterial ProteinsChloridescytochrome C-550Cytochrome c GroupLight-Harvesting Protein ComplexesOxygenoxygen-evolving complex, 33 kDa proteinPhotosynthetic Reaction Center Complex Proteinsphotosystem II, chlorophyll-binding protein, CP-47Photosystem II Protein ComplexPsbU protein, Synechocystis

Identifiers

PMID11198421
OpenAlexW170331045

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.