Evidence map›Paper›PMID 11175365›Full record

ArticleOncogene2000

Ets regulation of the erbB2 promoter.

G K Scott, C H Chang, K M Erny, F Xu, W J Fredericks, F J Rauscher, A D Thor, C C Benz

Abstract read
PubMed Publisher
In one paragraph

Article in Oncogene, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 77 citations in OpenAlex.

  1. Review
  2. Review
  3. The Relevance of G-Quadruplexes for DNA Repair.International journal of molecular sciences · 2021
    Review
  4. Article
  5. Article
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  8. Article
  9. Journal of gastrointestinal oncology · 2017
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

G K ScottDivision of Oncology-Hematology, Department of Medicine, University of California at San Francisco, San Francisco, California, CA 94143, USA.
C H Chang
K M Erny
F Xu
W J Fredericks
F J Rauscher
A D Thor
C C Benz
University of California, San Francisco · USThe Wistar Institute · USNorthwestern University · US

Funding

Tissue and Outcomes CoreP50CA058207 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI GRAY, JOE W. · 1992 to 2012
$32.7M
THERAPEUTIC MODULATION OF BREAST CANCER ONCOGENES &ESTRR01CA036773 · NCI · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI BENZ, CHRISTOPHER · 1985 to 2007
$2.4M
TRANSFORMING GENES EXPRESSION IN BREAST CANCERP01CA044768 · NCI · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI BENZ, CHRISTOPHER · 1987 to 2000
$890k
NCI NIH HHS P01-CA44768NCI NIH HHS P50 CA058207NCI NIH HHS P50-CA58207NCI NIH HHS R01 CA036773NCI NIH HHS R01-CA36773
6 · The paper itself

Abstract

Evaluating the chromatinized erbB2 gene in nuclei from breast cancer cells expressing varying levels of ErbB2 transcripts, we identified a nuclease-sensitive site within a 0.22 kb region of maximum enhancer activity centered over a conserved 28 bp polypurine(GGA)-polypyrimidine(TCC) mirror-repeat and an adjacent essential Ets binding site (EBS). Promoter footprinting with nuclear extracts reveals an intense Ets hypersensitivity site at the EBS whose degree of intensity correlates with the level of cellular ErbB2 expression. In vitro mapping assays show that the supercoiled erbB2 promoter forms an internal triplex structure (Hr-DNA) at the mirror-repeat element. Mutations preventing Hr-DNA formation can enhance erbB2 promoter activity in human breast cancer cells, a result consistent with previous demonstration that Ets-erbB2 promoter complexes cannot form when the mirror-repeat is engaged in triplex binding, and new results suggesting that Ets binding induces severe promoter bending that may restrict local triplex formation. In addition to previously described erbB2-regulating breast cancer Ets factors (PEA3, ESX/Elf-3), Elf-1 is now shown to be another endogenously expressed Ets candidate capable of binding to and upregulating the erbB2 promoter. Given current strategies to transcriptionally inhibit ErbB2 overexpression, including development of novel erbB2 promoter-targeted therapeutics, an EBS-targeted approach is presented using chimeric Ets proteins that strongly repress erbB2 promoter activity.

Indexed as

Enhancer Elements, GeneticGene Expression Regulation, NeoplasticGenes, erbB-2AdenocarcinomaBinding SitesBreast NeoplasmsDNA-Binding ProteinsDNA FootprintingDNA, SuperhelicalFemaleForecastingGene SilencingGenetic TherapyHumansMacromolecular SubstancesMultigene FamilyDNA-Binding ProteinsDNA, SuperhelicalELF3 protein, humanMacromolecular SubstancesNeoplasm ProteinsProto-Oncogene ProteinsProto-Oncogene Proteins c-etsProto-Oncogene Protein Spi-1Trans-ActivatorsTranscription Factors

Identifiers

PMID11175365
OpenAlexW2092215775

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.