Evidence map›Paper›PMID 11171979›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2001

Ash1p is a site-specific DNA-binding protein that actively represses transcription.

M E Maxon, I Herskowitz

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Article
  2. Article
  3. Structure of a SIN3-HDAC complex from budding yeast.Nature structural & molecular biology · 2023
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Creating memories of transcription.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

M E MaxonDepartment of Biochemistry and Biophysics, University of California, 513 Parnassus Avenue, San Francisco, CA 94143-0448, USA.
I Herskowitz

Funding

GENETIC CONTROL OF MATING IN YEASTR01AI018738 · NIAID · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI HERSKOWITZ, IRA · 1985 to 1988
–
GENETIC CONTROL OF MATING IN YEASTR37AI018738 · NIAID · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI HERSKOWITZ, IRA · 1989 to 1998
–
NIAID NIH HHS AI18738
6 · The paper itself

Abstract

ASH1 encodes a protein that is localized specifically to the daughter cell nucleus, where it has been proposed to repress transcription of the HO gene. Using Ash1p purified from baculovirus-infected insect cells, we have shown that Ash1p binds specific DNA sequences in the HO promoter. DNase I protection analyses showed that Ash1p recognizes a consensus sequence, YTGAT. Mutation of this consensus abolishes Ash1p DNA binding in vitro. We have shown that Ash1p requires an intact zinc-binding domain in its C terminus for repression of HO in vivo and that this domain may be involved in DNA binding. A heterologous DNA-binding domain fused to an N-terminal segment of Ash1p functions as an active repressor of transcription. Our studies indicate that Ash1p is a DNA-binding protein of the GATA family with a separable transcriptional repression domain.

Indexed as

Saccharomyces cerevisiae ProteinsTranscription, GeneticZinc FingersAmino Acid MotifsAmino Acid SequenceAnimalsBinding SitesCell LineDNA-Binding ProteinsMolecular Sequence DataRabbitsRepressor ProteinsSpodopteraStructure-Activity RelationshipTranscription FactorsASH1 protein, S cerevisiaeDNA-Binding ProteinsRepressor ProteinsSaccharomyces cerevisiae ProteinsTranscription Factors

Identifiers

PMID11171979
PMCPMC29285

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.