Evidence map›Paper›PMID 11160888›Full record

ArticleNucleic acids research2001

Antisense-mediated decrease in DNA ligase III expression results in reduced mitochondrial DNA integrity.

U Lakshmipathy, C Campbell

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 82 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Decoding mitochondrial DNA damage and repair associated withFrontiers in cellular and infection microbiology · 2024
    Review
  5. Dynamic features of human mitochondrial DNA maintenance and transcription.Frontiers in cell and developmental biology · 2022
    Review
  6. Review
  7. Article
  8. Review
  9. Review
  10. Single-Nucleotide Polymorphisms of Genes Involved in Repair of Oxidative DNA Damage and the Risk of Recurrent Depressive Disorder.Medical science monitor : international medical journal of experimental and clinical research · 2016
    Article
  11. Article
  12. Mitochondrial DNA maintenance: an appraisal.Molecular and cellular biochemistry · 2015
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. DNA ligases as therapeutic targets.Translational cancer research · 2013
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

U LakshmipathyDepartment of Pharmacology, University of Minnesota Medical School, 6-120 Jackson Hall, 321 Church Street SE, Minneapolis, MN 55455, USA.
C Campbell
University of Minnesota Medical Center · US

Funding

RAD52 FUNCTION IN MAMMALIAN SOMATIC CELLSR29CA061906 · NCI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI CAMPBELL, COLIN R · 1997 to 2001
$205k
NCI NIH HHS CA61906NIA NIH HHS AG11678Wellcome Trust
6 · The paper itself

Abstract

The human DNA ligase III gene encodes both nuclear and mitochondrial proteins. Abundant evidence supports the conclusion that the nuclear DNA ligase III protein plays an essential role in both base excision repair and homologous recombination. However, the role of DNA ligase III protein in mitochondrial genome dynamics has been obscure. Human tumor-derived HT1080 cells were transfected with an antisense DNA ligase III expression vector and clones with diminished levels of DNA ligase III activity identified. Mitochondrial protein extracts prepared from these clones had decreased levels of DNA ligase III relative to extracts from cells transfected with a control vector. Analysis of these clones revealed that the DNA ligase III antisense mRNA-expressing cells had reduced mtDNA content compared to control cells. In addition, the residual mtDNA present in these cells had numerous single-strand nicks that were not detected in mtDNA from control cells. Cells expressing antisense ligase III also had diminished capacity to restore their mtDNA to pre-irradiation levels following exposure to gamma-irradiation. An antisense-mediated reduction in cellular DNA ligase IV had no effect on the copy number or integrity of mtDNA. This observation, coupled with other evidence, suggests that DNA ligase IV is not present in the mitochondria and does not play a role in maintaining mtDNA integrity. We conclude that DNA ligase III is essential for the proper maintenance of mtDNA in cultured mammalian somatic cells.

Indexed as

DNA, AntisenseDNA DamageDNA Ligase ATPDNA LigasesDNA, MitochondrialElectron TransportGene Expression Regulation, EnzymologicHumansMitochondriaOxygenPlasmidsPoly-ADP-Ribose Binding ProteinsRNA, MessengerTransfectionTumor Cells, CulturedXenopus ProteinsDNA, AntisenseDNA Ligase ATPDNA ligase III alpha protein, XenopusDNA LigasesDNA, MitochondrialLIG3 protein, humanOxygenPoly-ADP-Ribose Binding ProteinsRNA, MessengerXenopus Proteins

Identifiers

PMID11160888
PMCPMC30390
OpenAlexW2058962018

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.