Evidence map›Paper›PMID 11158566›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2001

Bacterial RNA polymerase subunit omega and eukaryotic RNA polymerase subunit RPB6 are sequence, structural, and functional homologs and promote RNA polymerase assembly.

L Minakhin, S Bhagat, A Brunning, E A Campbell, S A Darst, R H Ebright, K Severinov

Abstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 94 papers.

0numbers the graph read from it
0cells of the map it votes in
94citing papers in PubMed
6.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

94 citing papers in PubMed, 222 citations in OpenAlex.

  1. Review
  2. Dissection ofmBio · 2026
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  13. RNA Pol II Assembly Affects ncRNA Expression.International journal of molecular sciences · 2023
    Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Article

34 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

L MinakhinWaksman Institute, Department of Genetics, Department of Chemistry and Howard Hughes Medical Institute, Rutgers, The State University, Piscataway, NJ 08854, USA.
S Bhagat
A Brunning
E A Campbell
S A Darst
R H Ebright
K Severinov
Rockefeller University · USHoward Hughes Medical Institute · USRutgers, The State University of New Jersey · US

Funding

E COLI RNA POLYMERASE SUBUNIT--STRUCTURE/FUNCTIONR01GM053759 · NIGMS · ROCKEFELLER UNIVERSITY · PI DARST, SETH A. · 1996 to 2015
$6.9M
TRANSCRIPTION ACTIVATION BY CAPR01GM041376 · NIGMS · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI RICHARD H. EBRIGHT · 1989 to 2026
$6.5M
BACTERIAL TRANSCRIPTION COMPLEXESR37GM041376 · NIGMS · RUTGERS, THE STATE UNIV OF N.J. · PI EBRIGHT, RICHARD H. · 2013 to 2022
$5.0M
Phage-induced modifications of RNA polymeraseR01GM059295 · NIGMS · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI SEVERINOV, KONSTANTIN V · 1999 to 2013
$4.5M
PROTEIN PROTEIN INTERACTIONS IN TRANSCRIPTION INITIATIONR01GM053665 · NIGMS · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI EBRIGHT, RICHARD H. · 1996 to 2003
$663k
NIGMS NIH HHS GM41376NIGMS NIH HHS GM53665NIGMS NIH HHS GM59295NIGMS NIH HHS R01 GM041376NIGMS NIH HHS R01 GM053665NIGMS NIH HHS R01 GM053759NIGMS NIH HHS R01 GM059295NIGMS NIH HHS R37 GM041376
6 · The paper itself

Abstract

Bacterial DNA-dependent RNA polymerase (RNAP) has subunit composition beta'betaalpha(I)alpha(II)omega. The role of omega has been unclear. We show that omega is homologous in sequence and structure to RPB6, an essential subunit shared in eukaryotic RNAP I, II, and III. In Escherichia coli, overproduction of omega suppresses the assembly defect caused by substitution of residue 1362 of the largest subunit of RNAP, beta'. In yeast, overproduction of RPB6 suppresses the assembly defect caused by the equivalent substitution in the largest subunit of RNAP II, RPB1. High-resolution structural analysis of the omega-beta' interface in bacterial RNAP, and comparison with the RPB6-RPB1 interface in yeast RNAP II, confirms the structural relationship and suggests a "latching" mechanism for the role of omega and RPB6 in promoting RNAP assembly.

Indexed as

Saccharomyces cerevisiae ProteinsAmino Acid SequenceArchaeaBacteriaConsensus SequenceDatabases as TopicDNA-Directed RNA PolymerasesModels, MolecularMolecular Sequence DataPhosphoproteinsProtein ConformationProtein Structure, SecondaryProtein SubunitsRecombinant ProteinsRNA Polymerase IRNA Polymerase IIDNA-Directed RNA PolymerasesPhosphoproteinsProtein SubunitsRecombinant ProteinsRNA Polymerase IRNA Polymerase IIRNA Polymerase IIIRPO26 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID11158566
PMCPMC14680
OpenAlexW2090678715

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.