Evidence map›Paper›PMID 11158316›Full record

ArticleMolecular and cellular biology2001

The iab-7 polycomb response element maps to a nucleosome-free region of chromatin and requires both GAGA and pleiohomeotic for silencing activity.

R K Mishra, J Mihaly, S Barges, A Spierer, F Karch, K Hagstrom, S E Schweinsberg, P Schedl

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed, 178 citations in OpenAlex.

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  6. Transcriptional read through interrupts boundary function in Drosophila.bioRxiv : the preprint server for biology · 2023
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  8. The Paramount Role ofInsects · 2021
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  9. GAGA factor: a multifunctional pioneering chromatin protein.Cellular and molecular life sciences : CMLS · 2021
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  12. Homeotic Genes: Clustering, Modularity, and Diversity.Frontiers in cell and developmental biology · 2021
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  13. DifferentiatingeLife · 2020
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  14. The insulator functions of theScience advances · 2020
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25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

R K MishraDépartement de Zoologie et Biologie Animale, Université de Genève, 1211 Geneva 4, Switzerland.
J Mihaly
S Barges
A Spierer
F Karch
K Hagstrom
S E Schweinsberg
P Schedl
University of Geneva · CHPrinceton University · USInstitute of Genetics · HU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the work reported here we have undertaken a functional dissection of a Polycomb response element (PRE) from the iab-7 cis-regulatory domain of the Drosophila melanogaster bithorax complex (BX-C). Previous studies mapped the iab-7 PRE to an 860-bp fragment located just distal to the Fab-7 boundary. Located within this fragment is an approximately 230-bp chromatin-specific nuclease-hypersensitive region called HS3. We have shown that HS3 is capable of functioning as a Polycomb-dependent silencer in vivo, inducing pairing-dependent silencing of a mini-white reporter. The HS3 sequence contains consensus binding sites for the GAGA factor, a protein implicated in the formation of nucleosome-free regions of chromatin, and Pleiohomeotic (Pho), a Polycomb group protein that is related to the mammalian transcription factor YY1. We show that GAGA and Pho interact with these sequences in vitro and that the consensus binding sites for the two proteins are critical for the silencing activity of the iab-7 PRE in vivo.

Indexed as

DNA-Binding ProteinsDrosophila ProteinsGenes, InsectAmino Acid MotifsAnimalsAnimals, Genetically ModifiedBase SequenceBinding SitesChromatinChromosome MappingConserved SequenceDNA PrimersDrosophila melanogasterEye ColorGene SilencingHomeodomain ProteinsChromatinDNA-Binding ProteinsDNA PrimersDrosophila ProteinsHomeodomain ProteinsInsect ProteinsNucleosomesPc protein, DrosophilaPolycomb Repressive Complex 1Transcription FactorsTrl protein, Drosophila

Identifiers

PMID11158316
PMCPMC99583
OpenAlexW2098572478

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.