Evidence map›Paper›PMID 11157762›Full record

ArticleThe EMBO journal2001

The crystal structure of the ttCsaA protein: an export-related chaperone from Thermus thermophilus.

S Kawaguchi, J Müller, D Linde, S Kuramitsu, T Shibata, Y Inoue, D G Vassylyev, S Yokoyama

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 2 countries.

S KawaguchiRIKEN Harima Institute at SPring-8, 1-1-1 Kouto, Mikazuki-cho, Sayo-Gun, Hyogo 679-5148, Japan.
J Müller
D Linde
S Kuramitsu
T Shibata
Y Inoue
D G Vassylyev
S Yokoyama
Carnegie Observatories · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The CsaA protein was first characterized in Bacillus subtilis as a molecular chaperone with export-related activities. Here we report the 2.0 Angstrom-resolution crystal structure of the Thermus thermophilus CsaA protein, designated ttCsaA. Atomic structure and experiments in solution revealed a homodimer as the functional unit. The structure of the ttCsaA monomer is reminiscent of the well known oligonucleotide-binding fold, with the addition of extensions at the N- and C-termini that form an extensive dimer interface. The two identical, large, hydrophobic cavities on the protein surface are likely to constitute the substrate binding sites. The CsaA proteins share essential sequence similarity with the tRNA-binding protein Trbp111. Structure-based sequence analysis suggests a close structural resemblance between these proteins, which may extend to the architecture of the binding sites at the atomic level. These results raise the intriguing possibility that CsaA proteins possess a second, tRNA-binding activity in addition to their export-related function.

Indexed as

Amino Acid SequenceBacterial ProteinsBase SequenceCrystallography, X-RayDimerizationDNA PrimersModels, MolecularMolecular ChaperonesMolecular Sequence DataProtein Structure, QuaternaryProtein SubunitsSequence Homology, Amino AcidThermus thermophilusBacterial ProteinsCsaA protein, Bacillus subtilisDNA PrimersMolecular ChaperonesProtein Subunits

Identifiers

PMID11157762
PMCPMC133483
OpenAlexW2049391306

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.