Evidence map›Paper›PMID 11156617›Full record

ArticleGenome research2001

Human and mouse alpha-synuclein genes: comparative genomic sequence analysis and identification of a novel gene regulatory element.

J W Touchman, A Dehejia, O Chiba-Falek, D E Cabin, J R Schwartz, B M Orrison, M H Polymeropoulos, R L Nussbaum

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Genome research, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 126 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

J W TouchmanNIH Intramural Sequencing Center, National Institutes of Health, Gaithersburg, Maryland 20877, USA.
A Dehejia
O Chiba-Falek
D E Cabin
J R Schwartz
B M Orrison
M H Polymeropoulos
R L Nussbaum
National Institutes of Health · US

Funding

GENETICS OF PARKINSON'S DISEASEZ01HG000117 · NHGRI · HUMAN GENOME RESEARCH · PI NUSSBAUM, ROBERT L · 1997 to 2005
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6 · The paper itself

Abstract

The human alpha-synuclein gene (SNCA) encodes a presynaptic nerve terminal protein that was originally identified as a precursor of the non-beta-amyloid component of Alzheimer's disease plaques. More recently, mutations in SNCA have been identified in some cases of familial Parkinson's disease, presenting numerous new areas of investigation for this important disease. Molecular studies would benefit from detailed information about the long-range sequence context of SNCA. To that end, we have established the complete genomic sequence of the chromosomal regions containing the human and mouse alpha-synuclein genes, with the objective of using the resulting sequence information to identify conserved regions of biological importance through comparative sequence analysis. These efforts have yielded approximately 146 and approximately 119 kb of high-accuracy human and mouse genomic sequence, respectively, revealing the precise genetic architecture of the alpha-synuclein gene in both species. A simple repeat element upstream of SNCA/Snca has been identified and shown to be necessary for normal expression in transient transfection assays using a luciferase reporter construct. Together, these studies provide valuable data that should facilitate more detailed analysis of this medically important gene.

Indexed as

Regulatory Sequences, Nucleic Acidalpha-SynucleinAnimalsBase SequenceCell LineChromosome MappingDatabases, FactualHumansMiceMice, Inbred C57BLMolecular Sequence DataNerve Tissue ProteinsRepetitive Sequences, Nucleic AcidSequence Analysis, DNASynucleinsalpha-SynucleinNerve Tissue ProteinsSNCA protein, humanSnca protein, mouseSynucleins

Identifiers

PMID11156617
PMCPMC311023
OpenAlexW2171348543

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.