Evidence map›Paper›PMID 11136855›Full record

ArticleThe Journal of physiology2001

GYGD pore motifs in neighbouring potassium channel subunits interact to determine ion selectivity.

M L Chapman, H S Krovetz, A M VanDongen

Open access · greenAbstract read
In one paragraph

Article in The Journal of physiology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. New Insights into Plant TPK Ion Channel Evolution.Plants (Basel, Switzerland) · 2021
    Article
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  7. Localization-dependent activity of the Kv2.1 delayed-rectifier K+ channel.Proceedings of the National Academy of Sciences of the United States of America · 2010
    Article
  8. Article
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  11. Article
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  14. Article
  15. pH sensing in the two-pore domain K+ channel, TASK2.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

M L ChapmanDepartment of Pharmacology and Cancer Biology, Duke University Medical Center, PO Box 3813, Durham, NC 27708, USA.
H S Krovetz
A M VanDongen
Duke University Hospital · USDuke Medical Center · US

Funding

The Molecular Basis of Ion Channel OpeningR01NS031557 · NINDS · DUKE UNIVERSITY · PI VANDONGEN, ANTONIUS M · 1993 to 2004
$1.3M
NINDS NIH HHS NS31557NINDS NIH HHS R01 NS031557
6 · The paper itself

Abstract

Cells maintain a negative resting membrane potential through the constitutive activity of background K+ channels. A novel multigene family of such K+ channels has recently been identified. A unique characteristic of these K+ channels is the presence of two homologous, subunit-like domains, each containing a pore-forming region. Sequence co-variations in the GYGD signature motifs of the two pore regions suggested an interaction between neighbouring pore domains. Mutations of the GYGD motif in the rat drk1 (Kv2.1) K+ channel showed that the tyrosine (Y) position was important for K+ selectivity and single channel conductance, whereas the aspartate (D) position was a critical determinant of open state stability. Tandem constructs engineered to mimic the GYGx-GxGD pattern seen in two-domain K+ channels delineated a co-operative intersubunit interaction between the Y and D positions, which determined ion selectivity, conductance and gating. In the bacterial KcsA K+ channel crystal structure, the equivalent aspartate residue (D80) does not directly interact with permeating K+ ions. However, the data presented here show that the D position is able to fine-tune ion selectivity through a functional interaction with the Y position in the neighbouring subunit. These data indicate a physiological basis for the extensive sequence variation seen in the GYGD motifs of two-domain K+ channels. It is suggested that a cell can precisely regulate its resting membrane potential by selectively expressing a complement of two-domain K+ channels.

Indexed as

Potassium Channels, Voltage-GatedAmino Acid MotifsAmino Acid SequenceAnimalsCell Membrane PermeabilityDelayed Rectifier Potassium ChannelsGenetic EngineeringIon Channel GatingMembrane PotentialsMolecular Sequence DataOligopeptidesPotassium ChannelsRatsReverse Transcriptase Polymerase Chain ReactionRNAShab Potassium ChannelsDelayed Rectifier Potassium Channelsglycyl-tyrosyl-glycyl-aspartateKcnb1 protein, ratOligopeptidesPotassium ChannelsPotassium Channels, Voltage-GatedRNAShab Potassium ChannelsTyrosine

Identifiers

PMID11136855
PMCPMC2278399
OpenAlexW2096514941

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.