Evidence map›Paper›PMID 11136256›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2001

Multiplex allele-specific target amplification based on PCR suppression.

N E Broude, L Zhang, K Woodward, D Englert, C R Cantor

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. AAV vector-derived elements integrate into Cas9-generated double-strand breaks and disrupt gene transcription.Molecular therapy : the journal of the American Society of Gene Therapy · 2024
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  9. Diversity arrays technology (DArT) markers in apple for genetic linkage maps.Molecular breeding : new strategies in plant improvement · 2012
    Article
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  12. The evolutionary-developmental analysis of plant microRNAs.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2010
    Article
  13. Article
  14. Multigene amplification and massively parallel sequencing for cancer mutation discovery.Proceedings of the National Academy of Sciences of the United States of America · 2007
    Article
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  19. Microarray-based detection and genotyping of viral pathogens.Proceedings of the National Academy of Sciences of the United States of America · 2002
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

N E BroudeCenter for Advanced Biotechnology and Department of Biomedical Engineering, Boston University, Boston, MA 02215, USA. nebroude@hotmail.com
L Zhang
K Woodward
D Englert
C R Cantor

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have developed a strategy for multiplex PCR based on PCR suppression. PCR suppression allows DNA target amplification with only one sequence-specific primer per target and a second primer that is common for all targets. Therefore, an n-plex PCR would require only n + 1 primers. We have demonstrated uniform, efficient amplification of targeted sequences in 14-plex PCR. The high specificity of suppression PCR also provides multiplexed amplification with allele specificity. Multiplexed PCR was used to develop assays for genotyping DNA samples from cystic fibrosis-affected individuals. The new approach greatly simplifies primer design, significantly increases the PCR multiplexing level, and decreases the overall primer cost. In addition, this assay is more readily amenable to automation and is therefore suitable for high-throughput genetic diagnostics.

Indexed as

AllelesAutomationChromosomes, Human, Pair 7Cystic FibrosisCystic Fibrosis Transmembrane Conductance RegulatorDNA-Directed DNA PolymeraseDNA Mutational AnalysisDNA PrimersGene TargetingGenetic TestingGenotypeHumansNucleic Acid Amplification TechniquesOligodeoxyribonucleotidesPolymerase Chain ReactionSubstrate SpecificityCFTR protein, humanCystic Fibrosis Transmembrane Conductance RegulatorDNA-Directed DNA PolymeraseDNA PrimersOligodeoxyribonucleotides

Identifiers

PMID11136256
PMCPMC14569

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.