Evidence map›Paper›PMID 11134282›Full record

ArticleJournal of virology2001

Herpes simplex virus DNA cleavage and packaging proteins associate with the procapsid prior to its maturation.

A K Sheaffer, W W Newcomb, M Gao, D Yu, S K Weller, J C Brown, D J Tenney

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 89 papers.

0numbers the graph read from it
0cells of the map it votes in
89citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

89 citing papers in PubMed, 129 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Intranuclear HSV-1 DNA ejection induces major mechanical transformations suggesting mechanoprotection of nucleus integrity.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Herpesvirus Capsid Assembly and DNA Packaging.Advances in anatomy, embryology, and cell biology · 2017
    Review

29 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

A K SheafferBristol-Myers Squibb Pharmaceutical Research Institute, Wallingford, Connecticut 06492, USA.
W W Newcomb
M Gao
D Yu
S K Weller
J C Brown
D J Tenney
Bristol-Myers Squibb (United States) · USUConn Health · USUniversity of Virginia Health System · US

Funding

ASSEMBLY OF THE HERPES SIMPLEX VIRUS CAPSIDR01AI041644 · NIAID · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI BROWN, JAY CLARK · 1997 to 2012
$2.8M
HSV1 PROCESSING/PACKAGING GENESR01AI037549 · NIAID · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI WELLER, SANDRA K · 1995 to 2010
$2.7M
Assembly of the Herpes Simplex Virus CapsidR56AI041644 · NIAID · UNIVERSITY OF VIRGINIA · PI BROWN, JAY C. · 2007 to 2007
$354k
HSV 1 Processing/Packaging GenesR56AI037549 · NIAID · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI WELLER, SANDRA K · 2005 to 2005
$322k
NIAID NIH HHS AI37549NIAID NIH HHS AI41644NIAID NIH HHS R01 AI037549NIAID NIH HHS R01 AI041644NIAID NIH HHS R56 AI037549NIAID NIH HHS R56 AI041644
6 · The paper itself

Abstract

Packaging of DNA into preformed capsids is a fundamental early event in the assembly of herpes simplex virus type 1 (HSV-1) virions. Replicated viral DNA genomes, in the form of complex branched concatemers, and unstable spherical precursor capsids termed procapsids are thought to be the substrates for the DNA-packaging reaction. In addition, seven viral proteins are required for packaging, although their individual functions are undefined. By analogy to well-characterized bacteriophage systems, the association of these proteins with various forms of capsids, including procapsids, might be expected to clarify their roles in the packaging process. While the HSV-1 UL6, UL15, UL25, and UL28 packaging proteins are known to associate with different forms of stable capsids, their association with procapsids has not been tested. Therefore, we isolated HSV-1 procapsids from infected cells and used Western blotting to identify the packaging proteins present. Procapsids contained UL15 and UL28 proteins; the levels of both proteins are diminished in more mature DNA-containing C-capsids. In contrast, UL6 protein levels were approximately the same in procapsids, B-capsids, and C-capsids. The amount of UL25 protein was reduced in procapsids relative to that in more mature B-capsids. Moreover, C-capsids contained the highest level of UL25 protein, 15-fold higher than that in procapsids. Our results support current hypotheses on HSV DNA packaging: (i) transient association of UL15 and UL28 proteins with maturing capsids is consistent with their proposed involvement in site-specific cleavage of the viral DNA (terminase activity); (ii) the UL6 protein may be an integral component of the capsid shell; and (iii) the UL25 protein may associate with capsids after scaffold loss and DNA packaging, sealing the DNA within capsids.

Indexed as

Capsid ProteinsAnimalsBlotting, WesternCapsidCell LineDNA, ViralElectrophoresis, Polyacrylamide GelEndopeptidasesHerpes SimplexMutationProtein PrecursorsSimplexvirusViral ProteinsVirus AssemblyCapsid ProteinsDNA cleavage and packaging proteins, HerpesvirusDNA, ViralEndopeptidasesProtein PrecursorsViral Proteins

Identifiers

PMID11134282
PMCPMC113965
OpenAlexW2150063226

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.