Evidence map›Paper›PMID 11133959›Full record

ArticleJournal of bacteriology2001

Transcription of nhaA, the main Na(+)/H(+) antiporter of Escherichia coli, is regulated by Na(+) and growth phase.

N Dover, E Padan

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. The evolution of a NaJournal of bacteriology · 2026
    Article
  3. Different sodium and potassium homeostasis patterns between rare and abundant microbial taxa in biological soil crusts revealed by metatranscriptomics.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2026
    Article
  4. The evolution of a NabioRxiv : the preprint server for biology · 2026
    Article
  5. Microbiology (Reading, England) · 2026
    Article
  6. Review
  7. Article
  8. RpoS and the bacterial general stress response.Microbiology and molecular biology reviews : MMBR · 2024
    Review
  9. Article
  10. Article
  11. Divergently Transcribed ncRNAs inFrontiers in molecular biosciences · 2021
    Article
  12. Analysis of seven putative NaPhysiology and molecular biology of plants : an international journal of functional plant biology · 2019
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

N DoverDivision of Microbial and Molecular Ecology, Institute of Life Sciences, The Hebrew University of Jerusalem, 91904 Jerusalem, Israel.
E Padan
Hebrew University of Jerusalem · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The transcription of nhaA, encoding the main Na(+)/H(+) antiporter of Escherichia coli, is induced by Na(+), regulated by NhaR, and affected by H-NS. In this work the roles of the two nhaA promoters (P1 and P2) were studied by analysis of transcription both in vivo and in vitro and promoter mutations. We found that P1 is an NhaR-dependent, Na(+)-induced, and H-NS-affected promoter both in the exponential and stationary phases. An in vitro transcription assay demonstrated that P1 is activated by sigma(70)-RNA polymerase and both NhaR and H-NS increase the specificity of P1. Remarkably, in marked contrast to P1, P2 exhibits very low activity during the exponential phase but is induced in the stationary phase to become the major promoter. Furthermore, P2 is activated by sigma(S) and is neither induced by Na(+) nor dependent on NhaR or affected by H-NS. Hence, this work establishes that nhaA has a dual mode of regulation, each involving a different promoter, and reveals that P2 and sigma(S) together are responsible for the survival of stationary-phase cells in the presence of high Na(+), alkaline pH, and the combination of high Na(+) and alkaline pH, the most stressful condition.

Indexed as

Escherichia coli ProteinsBacterial ProteinsBase SequenceCell DivisionDNA-Binding ProteinsEscherichia coliGene Expression Regulation, BacterialMolecular Sequence DataPromoter Regions, GeneticSigma FactorSodiumSodium-Hydrogen ExchangersTranscription FactorsTranscription, GeneticBacterial ProteinsDNA-Binding ProteinsEscherichia coli ProteinsH-NS protein, bacteriaNhaA protein, E colinhaR protein, E coliSigma Factorsigma factor KatF protein, BacteriaSodiumSodium-Hydrogen ExchangersTranscription Factors

Identifiers

PMID11133959
PMCPMC94921
OpenAlexW2058836959

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.