ArticleNucleic acids research2001
The Mouse Gene Expression Database (GXD).
Article in Nucleic acids research, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
25 citing papers in PubMed, 155 citations in OpenAlex.
- A Review of Current Standards and the Evolution of Histopathology Nomenclature for Laboratory Animals.ILAR journal · 2018Article
- Automated transition analysis of activated gene regulation during diauxic nutrient shift in Escherichia coli and adipocyte differentiation in mouse cells.BMC bioinformatics · 2018Article
- Text mining in cancer gene and pathway prioritization.Cancer informatics · 2014Review
- The mouse Gene Expression Database (GXD): 2011 update.Nucleic acids research · 2011Article
- Automated pipeline for atlas-based annotation of gene expression patterns: application to postnatal day 7 mouse brain.Methods (San Diego, Calif.) · 2010Article
- Towards the use of argumentation in bioinformatics: a gene expression case study.Bioinformatics (Oxford, England) · 2008Article
- The mouse Gene Expression Database (GXD): 2007 update.Nucleic acids research · 2007Article
- Mouse Tumor Biology Database (MTB): status update and future directions.Nucleic acids research · 2007Article
- Databases of free expression.Mammalian genome : official journal of the International Mammalian Genome Society · 2006Review
- Bioinformatics methods for identifying candidate disease genes.Human genomics · 2006Article
- GeneSeeker: extraction and integration of human disease-related information from web-based genetic databases.Nucleic acids research · 2005Article
- Using ontologies to describe mouse phenotypes.Genome biology · 2005Article
- Anatomics: the intersection of anatomy and bioinformatics.Journal of anatomy · 2005Review
- Pathbase: a database of mutant mouse pathology.Nucleic acids research · 2004Article
- The mouse Gene Expression Database (GXD): updates and enhancements.Nucleic acids research · 2004Article
- Connecting sequence and biology in the laboratory mouse.Genome research · 2003Article
- Targeting a complex transcriptome: the construction of the mouse full-length cDNA encyclopedia.Genome research · 2003Article
- MEPD: a Medaka gene expression pattern database.Nucleic acids research · 2003Article
- CnidBase: The Cnidarian Evolutionary Genomics Database.Nucleic acids research · 2003Article
- MGD: the Mouse Genome Database.Nucleic acids research · 2003Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
9 authors at 1 institution in 1 country.
Funding
Abstract
The Gene Expression Database (GXD) is a community resource of gene expression information for the laboratory mouse. By combining the different types of expression data, GXD aims to provide increasingly complete information about the expression profiles of genes in different mouse strains and mutants, thus enabling valuable insights into the molecular networks that underlie normal development and disease. GXD is integrated with the Mouse Genome Database (MGD). Extensive interconnections with sequence databases and with databases from other species, and the development and use of shared controlled vocabularies extend GXD's utility for the analysis of gene expression information. GXD is accessible through the Mouse Genome Informatics web site at http://www.informatics.jax.org/ or directly at http://www.informatics.jax.org/menus/expression_menu. shtml.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.