Evidence map›Paper›PMID 11121482›Full record

ArticleNucleic acids research2000

Adenine excisional repair function of MYH protein on the adenine:8-hydroxyguanine base pair in double-stranded DNA.

K Shinmura, S Yamaguchi, T Saitoh, M Takeuchi-Sasaki, S R Kim, T Nohmi, J Yokota

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Nucleic acids research, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 87 citations in OpenAlex.

  1. Action-at-a-distance mutations by 8-oxo-7,8-dihydroguanine: adenine pair triggered by MUTYH.Genes and environment : the official journal of the Japanese Environmental Mutagen Society · 2025
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  6. In vivo measurements of interindividual differences in DNA glycosylases and APE1 activities.Proceedings of the National Academy of Sciences of the United States of America · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

K ShinmuraBiology Division, National Cancer Center Research Institute, 1-1 Tsukiji 5-chome, Chuo-ku, Tokyo 104-0045, Japan.
S Yamaguchi
T Saitoh
M Takeuchi-Sasaki
S R Kim
T Nohmi
J Yokota

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Adenine paired with 8-hydroxyguanine (oh(8)G), a major component of oxidative DNA damage, is excised by MYH base excision repair protein in human cells. Since repair activity of MYH protein on an A:G mismatch has also been reported, we compared the repair activity of His(6)-tagged MYH proteins, expressed in Spodoptera frugiperda Sf21 cells, on A:oh(8)G and A:G mismatches by DNA cleavage assay and gel mobility shift assay. We also compared the repair ability of type 1 mitochondrial protein with type 2 nuclear protein, as well as of polymorphic type 1-Q(324) and 2-Q(310) proteins with type 1-H(324) and 2-H(310) proteins by DNA cleavage assay and complementation assay of an Escherichia coli mutM mutY strain. In a reaction buffer with a low salt (0-50 mM) concentration, adenine DNA glycosylase activity of type 2 protein was detected on both A:oh(8)G and A:G substrates. However, in a reaction buffer with a 150 mM salt concentration, similar to physiological conditions, the glycosylase activity on A:G, but not on A:oh(8)G, was extremely reduced and the binding activity of type 2 protein for A:G, but not for A:oh(8)G, was proportionally reduced. The glycosylase activity on A:oh(8)G and the ability to suppress spontaneous mutagenesis were greater for type 2 than type 1 enzyme. There was apparently no difference in the repair activities between the two types of polymorphic MYH proteins. These results indicate that human MYH protein specifically catalyzes the glycosylase reaction on A:oh(8)G under physiological salt concentrations.

Indexed as

Escherichia coli ProteinsAdenineAnimalsBase Pair MismatchBase SequenceCarbon-Oxygen LyasesDeoxyribonuclease IV (Phage T4-Induced)DNADNA-(Apurinic or Apyrimidinic Site) LyaseDNA-Formamidopyrimidine GlycosylaseDNA GlycosylasesDNA RepairEscherichia coliGenes, BacterialGenetic Complementation TestGuanine8-hydroxyguanineAdenineCarbon-Oxygen LyasesDeoxyribonuclease IV (Phage T4-Induced)DNADNA-(Apurinic or Apyrimidinic Site) LyaseDNA-Formamidopyrimidine GlycosylaseDNA-formamidopyrimidine glycosylase, E coliDNA Glycosylasesendonuclease IV, E coliEscherichia coli ProteinsGuaninemutY adenine glycosylaseN-Glycosyl HydrolasesNuclear ProteinsOligodeoxyribonucleotidesPotassium ChlorideProtein IsoformsRecombinant Fusion ProteinsSodium Chloride

Identifiers

PMID11121482
PMCPMC115236
OpenAlexW2152630895

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.