Evidence map›Paper›PMID 11113186›Full record

ArticleMolecular and cellular biology2001

Tsc13p is required for fatty acid elongation and localizes to a novel structure at the nuclear-vacuolar interface in Saccharomyces cerevisiae.

S D Kohlwein, S Eder, C S Oh, C E Martin, K Gable, D Bacikova, T Dunn

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2001. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 96 papers.

0numbers the graph read from it
0cells of the map it votes in
96citing papers in PubMed
10.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

96 citing papers in PubMed, 226 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Engineering yeast for tailored fatty acid profiles.Applied microbiology and biotechnology · 2025
    Review
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Transcription Factor TaMYB30 Activates Wheat Wax Biosynthesis.International journal of molecular sciences · 2023
    Article
  15. Article
  16. Optimization of Pinocembrin Biosynthesis inACS synthetic biology · 2023
    Article
  17. Article
  18. Review
  19. Article
  20. Article

36 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

S D KohlweinSFB Biomembrane Research Center, Department of Biochemistry, Technical University Graz, A8010 Graz, Austria.
S Eder
C S Oh
C E Martin
K Gable
D Bacikova
T Dunn
Uniformed Services University of the Health Sciences · USGraz University of Technology · ATRutgers, The State University of New Jersey · US

Funding

REGULATION OF FATTY ACID METABOLISMR01GM045768 · NIGMS · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI MARTIN, CHARLES E · 1992 to 2002
$882k
SPHINGOLIPID BIOSYNTHESIS IN YEASTR01GM051891 · NIGMS · HENRY M. JACKSON FDN FOR THE ADV MIL/MED · PI DUNN, TERESA M · 1995 to 1998
–
NIGMS NIH HHS GM45768NIGMS NIH HHS GM51891NIGMS NIH HHS R01 GM045768
6 · The paper itself

Abstract

The TSC13/YDL015c gene was identified in a screen for suppressors of the calcium sensitivity of csg2Delta mutants that are defective in sphingolipid synthesis. The fatty acid moiety of sphingolipids in Saccharomyces cerevisiae is a very long chain fatty acid (VLCFA) that is synthesized by a microsomal enzyme system that lengthens the palmitate produced by cytosolic fatty acid synthase by two carbon units in each cycle of elongation. The TSC13 gene encodes a protein required for elongation, possibly the enoyl reductase that catalyzes the last step in each cycle of elongation. The tsc13 mutant accumulates high levels of long-chain bases as well as ceramides that harbor fatty acids with chain lengths shorter than 26 carbons. These phenotypes are exacerbated by the deletion of either the ELO2 or ELO3 gene, both of which have previously been shown to be required for VLCFA synthesis. Compromising the synthesis of malonyl coenzyme A (malonyl-CoA) by inactivating acetyl-CoA carboxylase in a tsc13 mutant is lethal, further supporting a role of Tsc13p in VLCFA synthesis. Tsc13p coimmunoprecipitates with Elo2p and Elo3p, suggesting that the elongating proteins are organized in a complex. Tsc13p localizes to the endoplasmic reticulum and is highly enriched in a novel structure marking nuclear-vacuolar junctions.

Indexed as

Membrane ProteinsSaccharomyces cerevisiae ProteinsAcetyltransferasesAmino Acid SequenceCell NucleusCell PolarityCeramidesCloning, MolecularConserved SequenceEndoplasmic ReticulumEnoyl-(Acyl-Carrier-Protein) Reductase (NADH)Fatty AcidsFungal ProteinsHumansMolecular Sequence DataMutationAcetyltransferasesCeramidesELO2 protein, S cerevisiaeEnoyl-(Acyl-Carrier-Protein) Reductase (NADH)Fatty AcidsFungal ProteinsMembrane ProteinsOxidoreductasesOxidoreductases Acting on CH-CH Group DonorsRecombinant Fusion ProteinsSaccharomyces cerevisiae ProteinsSphingolipidsSUR4 protein, S cerevisiaeTSC13 protein, S cerevisiae

Identifiers

PMID11113186
PMCPMC88785
OpenAlexW2160239356

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.