Evidence map›Paper›PMID 11102523›Full record

ArticleMolecular biology of the cell2000

The sodium/proton exchanger Nhx1p is required for endosomal protein trafficking in the yeast Saccharomyces cerevisiae.

K Bowers, B P Levi, F I Patel, T H Stevens

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 175 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Endosomal Acid-Base Homeostasis in Neurodegenerative Diseases.Reviews of physiology, biochemistry and pharmacology · 2023
    Article
  5. Article
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  7. The Role of Secretory Pathways inJournal of fungi (Basel, Switzerland) · 2020
    Review
  8. Review
  9. The NaMolecular biology of the cell · 2018
    Article
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9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

K BowersInstitute of Molecular Biology, University of Oregon, Eugene, Oregon 97403-1229, USA.
B P Levi
F I Patel
T H Stevens
University of Oregon · US

Funding

SORTING AND TRANSPORT OF YEAST MEMBRANE PROTEINSR01GM038006 · NIGMS · UNIVERSITY OF OREGON · PI STEVENS, TOM HALL · 1987 to 2016
$4.9M
NIGMS NIH HHS GM-38006NIGMS NIH HHS R01 GM038006
6 · The paper itself

Abstract

We show that the vacuolar protein sorting gene VPS44 is identical to NHX1, a gene that encodes a sodium/proton exchanger. The Saccharomyces cerevisiae protein Nhx1p shows high homology to mammalian sodium/proton exchangers of the NHE family. Nhx1p is thought to transport sodium ions into the prevacuole compartment in exchange for protons. Pulse-chase experiments show that approximately 35% of the newly synthesized soluble vacuolar protein carboxypeptidase Y is missorted in nhx1 delta cells, and is secreted from the cell. nhx1 delta cells accumulate late Golgi, prevacuole, and lysosome markers in an aberrant structure next to the vacuole, and late Golgi proteins are proteolytically cleaved more rapidly than in wild-type cells. Our results show that efficient transport out of the prevacuolar compartment requires Nhx1p, and that nhx1 delta cells exhibit phenotypes characteristic of the "class E" group of vps mutants. In addition, we show that Nhx1p is required for protein trafficking even in the absence of the vacuolar ATPase. Our analysis of Nhx1p provides the first evidence that a sodium/proton exchange protein is important for correct protein sorting, and that intraorganellar ion balance may be important for endosomal function in yeast.

Indexed as

Cation Transport ProteinsChloride ChannelsProtein TransportSaccharomyces cerevisiae ProteinsSodium-Hydrogen ExchangersVacuolar Proton-Translocating ATPasesAmino Acid SequenceCarrier ProteinsEndosomesFungal ProteinsMembrane ProteinsModels, BiologicalMolecular Sequence DataMutationProton-Translocating ATPasesSaccharomyces cerevisiaeCarrier ProteinsCation Transport ProteinsChloride ChannelsFungal ProteinsGEF1 protein, S cerevisiaeMembrane ProteinsNHX1 protein, S cerevisiaeProton-Translocating ATPasesSaccharomyces cerevisiae ProteinsSodium-Hydrogen ExchangersVacuolar Proton-Translocating ATPases

Identifiers

PMID11102523
PMCPMC15072
OpenAlexW2106705270

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.