ArticleGenetics2000
FARE, a new family of foldback transposons in Arabidopsis.
Article in Genetics, 2000. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.
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Who cites it
10 citing papers in PubMed, 16 citations in OpenAlex.
- Transposition of Mutator-like transposable elements (MULEs) resembles hAT and Transib elements and V(D)J recombination.Nucleic acids research · 2017Article
- MuTAnT: a family of Mutator-like transposable elements targeting TA microsatellites in Medicago truncatula.Genetica · 2015Article
- Tetris is a foldback transposon that provided the building blocks for an emerging satellite DNA of Drosophila virilis.Genome biology and evolution · 2014Article
- Article
- ModuleOrganizer: detecting modules in families of transposable elements.BMC bioinformatics · 2010Article
- The Foldback-like element Galileo belongs to the P superfamily of DNA transposons and is widespread within the Drosophila genus.Proceedings of the National Academy of Sciences of the United States of America · 2008Article
- Partial shotgun sequencing of the Boechera stricta genome reveals extensive microsynteny and promoter conservation with Arabidopsis.Plant physiology · 2006Article
- RYS1, a foldback transposon, is activated by tissue culture and shows preferential insertion points into the rye genome.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2005Article
- Article
- FB elements can promote exon shuffling: a promoter-less white allele can be reactivated by FB mediated transposition in Drosophila melanogaster.Molecular genetics and genomics : MGG · 2004Article
Corrections and comments
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Authors and funding
2 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
A new family of transposons, FARE, has been identified in Arabidopsis. The structure of these elements is typical of foldback transposons, a distinct subset of mobile DNA elements found in both plants and animals. The ends of FARE elements are long, conserved inverted repeat sequences typically 550 bp in length. These inverted repeats are modular in organization and are predicted to confer extensive secondary structure to the elements. FARE elements are present in high copy number, are heterogeneous in size, and can be divided into two subgroups. FARE1's average 1.1 kb in length and are composed entirely of the long inverted repeats. FARE2's are larger, up to 16.7 kb in length, and contain a large internal region in addition to the inverted repeat ends. The internal region is predicted to encode three proteins, one of which bears homology to a known transposase. FARE1.1 was isolated as an insertion polymorphism between the ecotypes Columbia and Nossen. This, coupled with the presence of 9-bp target-site duplications, strongly suggests that FARE elements have transposed recently. The termini of FARE elements and other foldback transposons are imperfect palindromic sequences, a unique organization that further distinguishes these elements from other mobile DNAs.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.